Pangasianodon hypophthalmus (striped catfish): 113543057
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Entry
113543057 CDS
T05759
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113543057 (smc4)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
113543057 (smc4)
Condensin II
113543057 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
THOC7
COG6_N
DUF6361
PRIMA1
Laminin_II
Motif
Other DBs
NCBI-GeneID:
113543057
NCBI-ProteinID:
XP_026796820
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MPSKTTKSSSAAKPRGKGSQDDGDDEMKEIKPHGEVHADDQDAPQTNGKKQRVIYSKQKD
LFCHRLPPPPPPAMTNEPGAPRLMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGK
SNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDGHKDIQSCTVEVHFQKIIDKEGDDYDVIP
DSKFYVSRTAGKDNSSSYHINGKKATFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMK
PKGQTEHDEGMLEYLEDIIGSCRLKEPINTLCRRVELLNEQRGEKLNRVKLVEKEKNALE
GEKNKAVEFLTLENDMFKKRSQLCQFYVHDLQQRVAEKEAEKQEIQEDTKGLTEKSNQLT
EEMKGKNEALKNVEKKVGKLTKFIESQKEKFTQLDLQDVEVREKLKHTKNKTKKLHKQLQ
KDKEKLEEVKNVPASSEKIITEASAQKEMLEKEKVKEEAALAQVMERLKEETSGLQQEKE
QKEKELLELSKAVNETRSQMDVAQSELDIYLSQHNTAVSQLNQAKEALQGTADTLKDRRA
AIKELKVKVPKCEQELKKDEEELKQISEQDGEAQAMVRDIRQKVEEAKSSLSTTRSRGKV
LDALMQQKRSGKIPGILGRLGDLGAIEEKYDIAISSSCGALDNIVVNTIDTAQKCVTFLK
AQNIGVATFIGLDKMKVWEKNMRAISTPENIPRLFDMVKVKDDSVRPAFYFALRDTLVAK
DLEQATRVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMKGRMGSSIGTEVTQEQLDKM
ESALKEKVAQLQGWQQRKQQLEESVHKQRQELRDMKNTLEKYTASIQSLEEQEIHLKSQI
KELEANVIAAAPDKAKQKQMEKNLEAFKKNYEAASSKAGKVEAEVKRLHNLIVDINSHKL
KAQQDKLDKINKELDECSSAITKAQVAIKTAGRNLKKAEETVTRLETEIAENEKLMEELT
EQLKKLEDQAGEIMKSCQEAEEAMPEVQEQHRGVLQEIKALQEQEHALQKESLNVRLKVE
QIDTAIAECQNKIKHWEKESTKLALHSIDDKPAEELPKLTTEQLEAIKSPDVIKNEIALL
EDRCAQMKPNLGAIAEFKKKEELYLQRVAELDEITTQRDNFKRSCEDLRKQRLNEFMAGF
NIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGGEKTLS
SLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEMA
DRLIGIYKTHNTTKNVGINPKTIVLKDIEVASG
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgaaaacgactaaaagctcctcggctgcgaagccccgggggaaagggtcgcag
gatgacggtgatgatgagatgaaggaaataaagcctcatggagaagtgcacgcagatgat
caggacgcaccgcagactaatggtaagaaacaaagggttatttattctaagcagaaggac
ttgttttgccacaggctccctccacccccaccccccgcgatgaccaacgaaccgggcgct
ccccgcctcatgatcacgcacatcgtcaatcggaacttcaaatcatacgccggggagcag
atcctagggcctttccataagcgcttttcctgtatcatcggtccaaacggcagcgggaaa
tccaacgtgatcgactcgatgctcttcgtatttggatacagagcgcaaaaaatcaggtcc
aaaaagctgtctgtgcttattcacagttctgacgggcacaaggacatccagagctgcact
gtagaggtgcactttcagaagattatcgacaaggaaggagatgactacgatgtcatccct
gacagcaagttttacgtttcaagaactgccggtaaagataattcctcatcctaccacatc
aatggcaaaaaggcaaccttcaaagatgttggaattttgctccgtagccatggcattgac
cttgaccacaaccgatttctcattctacagggagaagtggagcagattgcgatgatgaag
cccaaaggccagacggagcatgatgaaggcatgctggaatacctggaggacatcattggc
tcctgccgactcaaagagcccatcaacacgctgtgcagacgagtggagctactaaatgag
cagagaggggaaaagctgaatcgcgtgaagttggtggagaaggagaagaacgccctggag
ggtgaaaagaataaagcagtggaatttctcaccctagagaatgacatgtttaagaagaga
agccaactctgccagttctatgtacatgatttgcagcagcgtgtggctgaaaaggaagca
gaaaaacaagagatccaggaggacaccaagggactgactgaaaaaagcaaccagctcaca
gaggaaatgaaggggaagaatgaagccctgaagaatgtggagaagaaagtgggcaagctg
accaagttcattgagagccagaaggagaagttcacccagttggacctccaggacgtggag
gtgcgggagaagctcaagcacaccaagaacaagaccaagaaactccacaaacagctgcag
aaggacaaggaaaagttggaggaagtgaaaaacgttccagccagcagtgaaaagatcatc
acagaggcttctgcccagaaagaaatgttggagaaagagaaggttaaggaggaagcagct
ctggcccaggtgatggagcgcctgaaggaggagaccagtggcttgcagcaggaaaaggag
caaaaagagaaggagcttctggagctaagtaaagctgtgaatgagacccgctcgcagatg
gacgtagctcagtcagagctggacatctacctgagtcagcacaacacagccgtttcacag
ctcaaccaggctaaggaggccctacagggaactgctgacacactcaaagacagaagagct
gccatcaaagagctgaaggtcaaagttcccaagtgtgagcaggagcttaaaaaggatgaa
gaggagctgaagcagatttctgagcaggatggagaggcccaggctatggtcagggacata
aggcagaaggttgaagaggccaagtcctctctgtccaccacccgcagccgaggcaaagtg
cttgacgcactcatgcagcagaaacgcagtggcaagatccctggcatcctgggacgtctg
ggtgatctgggagctattgaggagaaatatgacattgctatctcatcaagttgtggcgca
ctcgataacattgtggtgaacaccattgacacagctcagaaatgtgtcaccttccttaag
gcccagaatattggagtggcgaccttcattggtctagataagatgaaggtctgggagaaa
aacatgagagccatctccacaccagagaacattccccgtttgtttgatatggtcaaagta
aaggatgattccgtccgtcccgccttctacttcgccctgagagacaccctggtggctaaa
gacctggagcaggcgactagagtggccttccagaaagacaaacgctggagagtggtcact
ctgcagggacagatcatcgaacaggctggcactatgacgggaggaggagggcgtgtaatg
aaagggagaatgggctcttctattggcactgaagtcacacaggaacagctggacaaaatg
gagagtgcattaaaggagaaggtggcgcagctgcagggctggcagcaaaggaaacagcag
cttgaggagagtgtgcacaaacagagacaggagctcagagacatgaagaacacgttggag
aaatacacagccagcattcagagtcttgaggagcaagagattcacctgaagtctcagata
aaggagctggaagcaaatgttattgctgctgccccagacaaagccaagcaaaaacagatg
gagaaaaacctggaagccttcaagaaaaattatgaggctgcatccagcaaggcaggaaag
gttgaagctgaggtgaaacgactccacaacctaattgtggacatcaacagccataagttg
aaggcccaacaggataaactggataagatcaacaaagagcttgatgagtgttcatcagca
atcaccaaagcccaagtggctatcaagacggcaggacgtaatctgaaaaaggcagaggag
acggttacgcgactggaaactgagattgcagagaatgagaaattaatggaggagctcaca
gagcagctgaagaaactggaggatcaagcaggagagatcatgaagtcctgccaggaggct
gaggaggcgatgcctgaggtgcaggaacagcatcggggggtcttgcaggagatcaaggct
cttcaggaacaagagcacgctctgcagaaagagtcgctgaatgttcggctgaaagtggag
caaatcgacacagccatcgctgagtgtcagaataagatcaaacactgggaaaaagagtcc
acaaagcttgctctgcactcgattgatgataaaccagcagaggaactgcctaagctgacc
acagagcagttggaggccattaaaagcccagatgtcatcaaaaacgagattgctcttttg
gaggatcgctgtgcccagatgaagcccaacctgggagctatagcagagtttaagaagaag
gaggagctttatttgcagagagtagctgagctggatgagattaccacccagagagacaac
ttcaagaggagctgcgaggacctgcggaaacagagactgaacgagttcatggctggcttt
aacatcattaccaacaagctgaaggagaactaccagatgctgacactggggggtgatgct
gagctggagcttgtggacagcctggaccctttctctgagggcatcatgtttagtgtgcgt
cctcctaagaagagctggaagaaaatctataacttgtctggaggagagaagactctgagc
tctttggctttggtcttcgcgctgcaccacttcaagcccacacctctgtacttcatggac
gagatagacgctgctctggatttcaagaatgtgtccattgtggcctgttacatatatgaa
caaaccaagaatgcgcagttcataatcatctctctgaggaacaacatgtttgagatggct
gaccgcctgattggcatctacaaaacacacaacaccactaaaaacgtgggaatcaacccc
aaaaccattgtcctcaaagacattgaagttgcatcaggataa
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