Pangasianodon hypophthalmus (striped catfish): 113543989
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Entry
113543989 CDS
T05759
Name
(RefSeq) sorting nexin-18-like
KO
K17923
sorting nexin-9/18/33
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113543989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113543989
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113543989
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
113543989
Macropinocytosis
Sorting nexins
113543989
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
113543989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
Vps5
BAR
Motif
Other DBs
NCBI-GeneID:
113543989
NCBI-ProteinID:
XP_026798351
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
TTHDPSVRQHKHQPSRANSVSSRGSGGPQARSSATVGKNLNRFSTFVKSGGEAFVLGEAS
GLVRDCDQICVVMGQFGPEWQENPHPFTCTIDDPTKQTKFKGMKSYMSYGLMPSHTQIPV
NRRYKHFDWLYARLVERFPVISVPHLPEKQATGRFEEDFICKRRKGLIWWMNHMTSHPVL
SRCDVFQHFLTCSSSDEKAWKQGKRKAEKDHLVGANFFLTIVPPAAPLDLQEVESKVDGF
KTFTKKMDENIVQVNVTIGEFSRKQMTGFKKEYHKVGQAFRLLGQAFELDQQVYSVKLNQ
AMAFTGAAYETIGDYFAEQPRQDLDPVSDLLAIYQGHLANFPDIIHVQKGALTKAKESQK
DKDVPAAHDIHERCNIISCATLAEIQHFHRTRVRDFKAQMQHYLQQQISFFQRITAKLEE
ALHMYEQA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
acaactcacgacccgagcgtccgtcaacacaaacaccaacccagtcgcgccaactcggtg
tcttcacgcggcagcggtggcccacaagcccgaagctcagcaacggttgggaaaaacctt
aacaggttttctaccttcgtgaaatccggaggcgaggcgtttgttttgggcgaggcgtcc
ggattggtcagggactgtgatcaaatctgcgtagtcatgggtcagttcggtcccgagtgg
caagagaacccacatcctttcacgtgcaccatcgatgatccgaccaaacagaccaaattc
aaagggatgaagagttacatgtcgtacggcctcatgcccagccacacgcaaatccccgtg
aaccggcgctacaagcattttgactggctgtacgcacgcctcgtggaacgcttcccagtc
atctccgttccccaccttcccgagaagcaggccacgggtcgcttcgaggaggacttcatt
tgcaagcgcaggaagggtctgatctggtggatgaaccacatgacgagccacccggtttta
tccaggtgcgacgtttttcagcacttcctgacctgcagcagcagcgacgagaaagcctgg
aagcagggcaagcgcaaggctgagaaagatcacctggtgggcgccaacttcttcctcacc
atcgtcccgccggctgctccgctcgacctccaggaggtggaaagcaaagtggacggcttc
aagacgttcaccaaaaagatggacgagaacattgtgcaagtcaacgtgaccatcggcgag
ttctccaggaagcagatgactggatttaaaaaggagtatcataaagttggacaggccttt
cggttgctcgggcaggccttcgaactggaccagcaggtgtattcggtcaagctgaaccaa
gcgatggcgttcaccggggccgcctacgagaccatcggggactactttgccgaacaacct
cgccaggatctggatccggtgtcggatcttttagcgatttaccagggacatctagcaaac
ttcccagacatcatccacgttcagaaaggagctctgaccaaagcgaaggagagccagaag
gacaaagacgtcccggcggcgcacgacatccacgagcgctgcaacatcatttcctgtgcc
acactggccgagatccagcacttccaccgcacccgagtacgcgacttcaaggcccagatg
cagcactacctccagcagcagatctccttcttccagaggatcacagccaaactggaggaa
gcgctgcacatgtacgagcaggcttaa
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