Pangasianodon hypophthalmus (striped catfish): 113546023
Help
Entry
113546023 CDS
T05759
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A-like
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00310
Lysine degradation
phyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113546023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113546023
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
113546023
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113546023
HMT complexes
COMPASS/SET1 complex
113546023
COMPASS/SET1 complex (yeast)
113546023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
113546023
NCBI-ProteinID:
XP_026801519
LinkDB
All DBs
Position
Unknown
AA seq
1908 aa
AA seq
DB search
MMSDSGEKEGDNECVEFEVERAPNWSSYKLLVDPLLDGGKEKLYRYDGLHFSAPNPGIHP
PEVRDPRIARFWTKFKETNLPVPKFKIDENYVGPPKEVTFARLNDNIKAGFLTDMCRKFG
EVQEVEVLFNPKNKKHLGIAKVIFETVRGANDAVQKLHSTSVMGNRIHVELDPRGEKRMQ
YFQLLVSGLYTPFTLPLGEEAWGPQSPTYSSDSHSEYDPVKRLSHGLLSSSSALLGSTPF
DCSTPMSMDTAYSSMHQDTPCSFWQDTPHGSPMSHSNPGTPPHCEGLTNTTDTHTDTHAS
KNIPHSTPFITSESQYTYHNPHLVQLTPPTPNTRQGSLISITQMSWTSKGHMVSGGQSHK
VGRAPRGGHRDRAWGTKYQNAYNRRPEHRYVHRPGFNRSHYRSGCTTNLVPLVTFQGPSA
AQTQLDTSLAPLIQCSSSTNKPTEQTAMEAPIGNMDKEPSQPVSQIGNLRQIQTLCSQPL
GKTLDIPQKTPHNIFNSPPHVPEVQQQDTAVIKTPERCVSPEPHRSPSLESLHPEPVPSS
LDSRIKMLLGTQSPDSEENVENSNSEDWVSADIPQLSSKSGPSSPQSPDASRTLNFPASP
SHCSSTQQTSLTLGFEDVSPFPLPDSAEEGEEPQPSNENLSKIPVISTFCSMICPAQQPF
TNKLSLREGEASEEPTGPGTCSSPAPPVFPVLPPPVLLPPPPPRFPTLPPPVLPPMCGPS
PPLLPPVPVRITSPPPNFSGSPAPFCLPPKLPMGQVNRPPRWTNPPAPPPSAALPIPTRI
TQGKSHTVFPPPFAILPPPTPFPGLDGVRQAPCPTFNSAALPGYRAPWPPALLPVFDPSV
PPPGYLPVSESLHKATVDGVMAAVAAELKAIVKKDILRRMVEGVAFAGFDQWWDEREHSA
KISMVPLKSGESKEKGPVKLKVFEPWQTVESVGSEGTILGTGLGVGLRSALKLPSFKVKR
KDPSGEDPVEAKKSCPSSSPGHTLSEEAEAGRETHMQDEEVDEPQKEQGVPVVKRRHARP
LELDSDDDEEQEEEEEEEISGNMEELVSEQEERDQAKISISDQEDDDEGEEEGDRKEGRF
SAVKGEGRLSAVREDETHSDKEVISIASSESSSIVDYESTLSSRSDLSSSDESHYSSECE
EYEEDDEDDGESPSSEAPEEERAVEEIWISSDEDVEEYVSRTPARSSVNSWEDELDPPLT
PSAPLSNDGDPDDTLLGTDPQEELRVQVFLHSYGCQDPVTQHLSNKLELSDPALLSSAHE
PELQRPPSPAYRELSSDEGLETDLEDPGYTNELLEDSGNLRPPTPTGSLSESEPELELRH
GLAPPAADEVELPCTPGGGFETETETLVLSPARTTPLPLPPSPTGFHLFPSPPLYLSPPP
LPSSYPAYEETPKTPGRNNREEQRHHTAAITQDAVLRMAMHSPFSPSFLSVSPHTGSGVP
RTPGRDTDPSSPLSEDSEANFQQRQHWQGRRPRYLHQFHVHSTSSSPYSSDSSSSQTRDL
SFSTNQLAGFDVAHLRKRRERMQRKRRMILSQRNRRNTDDFQHMPVRSSFTKSSCDSAPD
LSMELAAQAKKPLQGLENRLENRLHQGPLESQRLPKPLYPWRKRKSWPHTSLFAPRSRRR
ERLLIDAVWTKGVNMEEIGHLKATYERMLLQNNTFDWLRSTHWVPHPPSSVPLEWPPKLP
GGVRYHMTGSARTEGFYIISKGDKLHYLRHTHAASGELTADTQYKNAPAQLPSSSRSGSD
FRAEQRRLLSSFSCDSDLLKFNQLKFRKKRLRFSRSRIHDWGLFAEEPIAADEMVIEYVG
QSIRQVIADMRERRYEQEGIGSSYLFRVDQDTIIDATKCGNLARFINHSCNPNCYAKVIT
VEAKKKIVIYSRQPISVNEEITYDYKFPIEDEKIPCLCGAENCRRTLN
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcgacagcggcgagaaggagggagataacgaatgtgttgaatttgaagtggaa
agagcaccgaactggagcagctacaaactgcttgttgatccgctgttggatggtggaaag
gaaaagctgtaccgctatgatggactgcatttcagcgcacctaatcctggaattcacccg
ccagaagtcagagaccccagaattgctcgcttttggaccaagtttaaagagacgaatctt
ccagtccccaagttcaagattgatgagaattacgttggcccaccaaaggaggtgacattc
gccaggctgaatgacaacatcaaggccgggttcttaacggacatgtgccgaaagttcgga
gaggtccaagaggtggaggttttgttcaatcccaagaataagaaacatttagggatagcc
aaagtcatttttgaaactgtccgaggggccaatgacgcggtgcaaaaacttcacagtact
tcagttatgggaaaccgcattcacgtggagttggacccaaggggagagaagaggatgcaa
tatttccagctgcttgtcagtgggctatatacaccctttactcttcctttaggggaagag
gcctggggaccacagtcacccacctacagctctgactcccacagtgagtatgacccggta
aagcgcctgtctcacgggttgctgtcttcatcttctgcgctccttggctccaccccattt
gattgctccacccctatgtccatggacacagcctattccagcatgcatcaggacactcca
tgtagtttctggcaggatactccacacggctcgcctatgtctcatagtaacccgggaacc
ccaccgcactgcgagggtcttacaaacacaacagatacacacactgacacacacgcctca
aaaaacatcccacattcgactccattcatcacctctgaatcccaatacacctatcacaat
cctcacctggtccaactaacgccaccaacgccaaatacgaggcaggggtctttaattagc
attactcaaatgtcctggacctctaaagggcacatggtatcaggaggccagtcccacaaa
gtcggcagggctcctcgaggtgggcacagggatcgtgcatggggcactaaataccagaac
gcatataaccgtaggccggagcatcgctacgtgcacagacctggattcaacagatcacac
tatcgctcgggatgcacaaccaatctagtgcctttagttacatttcaaggaccttcagct
gctcagacacagctagatacgtctctggcacctcttatccaatgtagtagtagcacaaat
aaacctacagaacaaacagccatggaagcacctataggaaatatggacaaggaaccaagt
cagccagtatcccagatcggtaacttgcgtcaaatacaaacattgtgctcacagccattg
gggaaaacattggatattcctcaaaaaacacctcataacatctttaactctcctcctcat
gtgcctgaggtgcaacagcaggacacagctgttataaaaaccccagaacggtgtgtctcc
cctgagccacacagaagcccctcattggagtcacttcatccagaaccagtgccaagcagc
ctggattctcgtatcaagatgctcctgggcactcagagtccagattcagaagagaatgtg
gagaattcaaactcagaagattgggtttccgcagacattcctcaactgtcctccaaatct
ggtccctcttctcctcaatcccctgatgcctcacgtaccctgaatttccctgcatctccc
agtcactgtagctccacacagcaaacttcacttacattgggttttgaagacgtgagtcct
tttccactgccagactcagcagaggaaggagaggaacctcaaccaagtaacgagaatctg
tccaagatacccgtcatttcaaccttctgttcaatgatatgcccagctcagcaacctttt
acgaataagctgtccctaagagaaggagaagcttcggaggagcccactggacctgggacc
tgctcttcacctgctcctcctgtattcccagtgcttcctcctcctgttctcctgcctcca
cctccacctcgctttcctacactaccacccccagttttgcctcctatgtgtggaccttcc
cctcccttactgccccctgtaccagttcgaatcacttctcctcctcctaacttctctgga
tctccagcacctttctgtctgccaccgaagctccccatgggacaagtgaacaggccccca
aggtggactaaccctcctgcacctcctccttctgcagctcttcctatcccgaccagaata
acccaggggaaatcccacactgtttttccacctccttttgccatccttcctcccccgaca
ccctttccaggtttggacggagtcagacaggcaccatgtccgacttttaattcagctgct
ctccctggctacagagcaccgtggccacccgcactcctgcctgtgtttgacccctctgtg
ccgcctccgggctacttacctgtgagtgagtcgctccacaaggccacggtggatggagtg
atggctgctgtagctgcagaactcaaggctatagtgaaaaaagacatccttcgcaggatg
gttgaaggcgttgcctttgcaggatttgatcaatggtgggatgagagggaacactcagct
aagatatcgatggttcctttgaaatctggagagagtaaagagaaagggcctgtgaagctt
aaggttttcgagccatggcagactgtggagagtgtggggtcagagggcacaatactaggc
acaggactgggtgtgggcctccgctctgccctcaaactgccttcatttaaggtgaaacgg
aaggatccatctggtgaggaccctgtggaggctaaaaagtcatgtccctcctcttcacct
ggtcacacactctcagaggaagcagaagcagggcgggagacacacatgcaggatgaagaa
gtggacgagccccaaaaggaacagggagtccctgtggtgaaacggcgtcatgccagacct
ctggagctggacagtgatgatgacgaggaacaggaggaggaggaggaggaggagatctct
gggaatatggaggagttggtttctgaacaagaggagagagatcaagcaaagatttcaatt
tctgatcaggaggatgatgacgagggagaagaagaaggtgacagaaaagaggggaggttt
tcagctgtgaagggagaagggaggctttcagctgtgagagaagatgaaactcactcagac
aaagaggtaattagcatagcgtcatcagaatcctcctccatcgtggattatgaatccaca
ctctcctcaagatctgacttgagctcctctgatgagagtcattactcctctgaatgtgag
gagtatgaggaagacgacgaggatgatggagaaagtccgtcatctgaagctcctgaagag
gagagagcagtggaggagatttggatctcatcagatgaagacgttgaagaatatgtatct
cgcacacctgctcgctcttctgtgaactcctgggaggacgagctcgacccacctctgact
ccgtctgctccactgtctaatgatggcgacccagacgacacactgctaggcactgatcca
caggaagagctgcgagtgcaagtgtttctgcacagctatggctgccaggatccagtcaca
cagcacttatctaacaaactcgagctgtctgaccctgctctgctttcttcagcccacgag
ccggagctgcagcgtccaccatcgccagcttatagagagctctcctctgatgaggggttg
gagacagacctggaggatccgggttacacaaatgaattactggaggattctgggaacctc
agaccccccacaccaacagggtctctgtcagaaagcgagcccgagctcgagctcaggcac
gggttagcgccccctgctgccgacgaggtggaactgccctgtactcctggaggaggtttt
gaaacagagactgaaactcttgttttatccccagctcgtactactcctctccctcttcca
ccttctcccacaggcttccatcttttcccatctcctccactgtacttgtctcctcctcct
ctcccatcctcttatcctgcctatgaggaaactcctaaaactccaggcaggaataacaga
gaggagcagagacatcatacagcagcaattacgcaagacgcagtactcaggatggcaatg
cacagcccgttctcgccttcctttctgtcagtatcacctcacacaggaagcggggttccc
agaactccaggacgagacacggatccgtcctcacctctttctgaggacagcgaggccaat
tttcagcagaggcagcattggcaaggtcggcgtccacgctatttgcaccaatttcacgtc
cacagcaccagctcctctccttactcctctgattcctcaagttcacagacaagagatttg
agtttctctacaaatcagctggcaggttttgatgttgcacatctcagaaagagaagagaa
cggatgcagcgtaaaaggagaatgatcctctcgcagagaaacaggcgaaacacggatgat
tttcagcacatgcctgtgagaagttcattcactaaatcatcatgtgattcagctccagat
ttgagcatggaattggcagctcaggccaaaaagccactgcagggactcgagaaccgatta
gaaaacaggcttcaccaggggccactggagagccagagactccccaaaccactgtacccg
tggagaaagagaaagtcgtggcctcacacttctttgtttgcccctcggtccagacggaga
gaaaggctgctgatcgatgctgtctggactaaaggagtgaacatggaggagattggccac
ctgaaggccacatatgagaggatgctgctgcaaaacaacaccttcgactggctcagaagc
acacactgggttccccatcctccgagcagcgttcctctggaatggccaccaaaattgccg
ggtggcgttcgctatcacatgactgggtctgcacgcacagagggattttacatcatcagc
aagggggataaactgcactacctccgacacacacacgctgcctcgggagaactgactgca
gacactcagtataagaacgctccagctcagcttccctcgtcatctcgttccggatcagat
ttccgagctgaacaacggcgcctgctctcctccttcagctgtgacagcgacctgctcaag
tttaaccaactgaagttccgtaagaagaggctgcgcttcagcaggagtcgcatccacgac
tggggattgtttgcagaggagccgatagctgctgatgagatggtgatcgaatacgtgggc
cagagcatacggcaggtgatagcagacatgcgtgagagacgctacgagcaggaaggcatc
ggcagcagctacctgttccgggtcgaccaggacaccatcatcgacgctaccaagtgcggc
aacctggccaggttcatcaaccacagctgtaacccaaactgctatgctaaagtcatcact
gtagaagccaaaaagaaaatagtcatctattctcggcagccgatcagcgtcaacgaagag
atcacgtatgattataaattccccatcgaggacgagaagatcccctgcctgtgtggagcc
gagaactgcagaagaaccctcaactag
DBGET
integrated database retrieval system
