KEGG   Pangasianodon hypophthalmus (striped catfish): 113546846
Entry
113546846         CDS       T05759                                 
Symbol
sf3b6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113546846 (sf3b6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phyp03041]
    113546846 (sf3b6)
Spliceosome [BR:phyp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113546846 (sf3b6)
 Complex B
    113546846 (sf3b6)
 Complex C
   U2 SnRNP specific factors
    113546846 (sf3b6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 113546846
NCBI-ProteinID: XP_026802738
LinkDB
Position
Unknown
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaggcggccaagcgagcgaatattcgcttacctccagaggtgaacaggatc
ctgtacatacgaaaccttccctacaagatcacagccgaggaaatgtacgacatctttggg
aaatatggaccaattcggcagattagagttggaaacacaccagagaccaggggaaccgcc
tacgtggtctatgaggacatctttgatgctaagaatgcctgtgaccacctttctggattc
aacgtttgcaacagatacctggttgttttgtactacaacgcgaacagagcattccagaaa
atggatacaaagaaaaaagaagagcagctgaagcttctcaaggagaaatatggcataaat
acggatcccccaaagtaa

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