Pangasianodon hypophthalmus (striped catfish): 113547075
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Entry
113547075 CDS
T05759
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
113547075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113547075
Transporters [BR:
phyp02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
113547075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
113547075
NCBI-ProteinID:
XP_026803082
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MAIHVEGLVAIALFYLLILFVGIWAAWKNKNSGVGYSTDQSESIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPGYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQLYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIVDININMSVIISALIAIFYTLV
GGLYSVAYTDVVQLFCIFVGLWISVPFALANPAVSDISVTAKKKVFQTPWLGKIDSSDGW
MWADNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCLIMALPSMLIGAIGAST
DWNQTSYGSVPPTEKDESDMILPIVLQHLCPPFISFFGLGAISAAVMSSADSSILSASSM
FARNIYQLAFRQSASDREIVWVMRITIFVFGALATAMALLTGTVYGLWYLSSDLVYVIIF
PQLISVLFIKGTNTYGSVAGYIFGLLLRIGGGEPYLKLPPFIYYPGWYEEEKVNHLTKEV
EHVVVQKFPFKTVAMLASLLGNAVFSYTAKYLFESGTLSPKYDFLNAVVAKHSKEIMDKT
ILVSNDNIILSEMAPVKPRTASSLAGTFMNKEVLTDEREISTELNNECE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggccatccatgtggaaggattggtggcgatcgcgctcttttatctgctcatcttattt
gttggaatttgggcagcttggaaaaacaaaaactctggggttggatacagtacagaccag
agtgaatctataatggtgggaggacgggacattgggctctttgtcggtggatttactatg
accgccacgtgggttggtggtggatatatcaatggaacagcagaatatgtgtatttgcct
ggctatggactggcatgggcacaggcaccctttggttatgcacttagcttggtagtaggt
ggtctgttctttgccaagcccatgcggtccaggggatatgtgaccatgctcgatcccttt
cagcagctttatgggaagagaatgggtggccttctctttataccagccttgatgggggaa
attttctggtcagcagccattttgtcagcactgggtgccaccttaagtgtcatagtggac
atcaacatcaacatgtctgttataatatcagcgctgattgccatcttctacacactggtg
ggtgggttatactcagtggcttacacagatgtggttcaacttttctgcatttttgtaggc
ttgtggatcagtgtaccttttgctttagccaaccctgcagtgtcagacatcagtgtgaca
gcaaagaaaaaagtatttcagactccgtggctgggcaagattgattcttcagatggttgg
atgtgggcagataacttttgcctactgatgttgggggggattccctggcaggtatatttt
caacgcgttctttctgcttcttcagctacttatgcccaagtcctctcgttcctggctgcc
tttggctgcctcattatggcgctcccttccatgctaatcggagccataggggcatctaca
gactggaaccagacatcatatggctctgtgccaccgacagagaaagatgaatcagacatg
attctgcctattgtgcttcaacatctttgcccacctttcatctcattcttcggcttgggg
gccatttcagctgctgtgatgtcatcagcagattcgtccattctttcagcaagctcaatg
tttgcacgcaacatctaccagcttgcattccgtcagtcggcatcggaccgagaaattgtc
tgggtgatgcgaatcacaatctttgtgtttggtgctttggccacggccatggctctcctg
accggaacggtttatggcttgtggtacctgagctcggatcttgtctatgttatcatcttt
cctcagctaattagtgtgctcttcattaagggaaccaacacttatggttcagtagctggc
tacatctttggcttgcttctgagaatcggtggtggggaaccttacctcaagcttccgcct
ttcatctactacccaggttggtatgaagaagagaaggtgaaccatctgaccaaagaggtg
gagcatgttgtggtgcagaagttccctttcaagactgtagccatgctagcttcacttttg
ggcaatgccgtcttctcatacacagccaagtatctctttgagagtggcacactctctccc
aagtatgacttcttgaatgctgtggttgccaagcacagcaaggaaatcatggacaagaca
attcttgtaagcaatgacaacatcatcctgtcagaaatggctcccgttaaaccaaggact
gcatcctccttggcaggaacattcatgaacaaggaggtccttactgatgaaagagaaatc
agtacagaactgaataatgaatgtgaatag
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