KEGG   Scheffersomyces stipitis: PICST_30484
Entry
PICST_30484       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K04513  Ras homolog gene family, member A
Organism
pic  Scheffersomyces stipitis
Pathway
pic04011  MAPK signaling pathway - yeast
pic04144  Endocytosis
pic04270  Vascular smooth muscle contraction
pic04510  Focal adhesion
pic04520  Adherens junction
pic04530  Tight junction
pic04625  C-type lectin receptor signaling pathway
pic04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pic00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04011 MAPK signaling pathway - yeast
    PICST_30484
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    PICST_30484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pic04131]
    PICST_30484
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pic04147]
    PICST_30484
   04031 GTP-binding proteins [BR:pic04031]
    PICST_30484
Membrane trafficking [BR:pic04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    PICST_30484
Exosome [BR:pic04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PICST_30484
  Exosomal proteins of other body fluids (saliva and urine)
   PICST_30484
  Exosomal proteins of colorectal cancer cells
   PICST_30484
  Exosomal proteins of bladder cancer cells
   PICST_30484
GTP-binding proteins [BR:pic04031]
 Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    PICST_30484
SSDB
Motif
Pfam: Ras Roc AAA_16 AGRB_N Zeta_toxin AAA_24 nSTAND1 AAA_22
Other DBs
NCBI-GeneID: 4838317
NCBI-ProteinID: XP_001383319
JGI: 30484
UniProt: A3LQX6
LinkDB
Position
3:173801..174403
AA seq 200 aa
MTMSQKRPYLFLVVGAHGVGKTSLLAEFIWPRTSHEDQLWQIQEARAENIDIDGREVKLV
LRDSMGRDYYDAFRPLLYPAVSMVLVCFAVNDRLSFVQAQTKFLRECKEYAPGVPYILVG
CKSDTREERIELLLVSKEEANLAATGMKAYRYMKCSATAHEGVREVFETATRLCMRLEYD
QHYKKQSRKIAKMSKKCSIM
NT seq 603 nt   +upstreamnt  +downstreamnt
atgacaatgtctcaaaaacggccatatttgtttctagttgttggtgcacatggggtcggc
aagacttctttgttagccgagttcatttggccgcgtacctctcatgaagaccagctctgg
caaatccaagaagcgagagctgaaaatatagatattgatggccgcgaggtcaaacttgtg
ctaagagactcgatgggtcgagactactacgatgcttttcgacctcttttgtatcctgcg
gtttcgatggtgctagtatgttttgctgtcaacgatcggctttcgtttgttcaagcccag
accaagttcttaagggagtgtaaagagtatgcccctggtgtaccttacattttggttgga
tgcaaatctgataccagggaagaacggattgagctcttgcttgtactgaaggaggaagca
aatcttgcagccacaggaatgaaagcttacagatacatgaaatgttcggctacggcccac
gaaggtgtgagagaagtttttgaaacggctacaagattatgcatgcggttagaatatgac
caacactacaagaaacagagcagaaaaattgctaaaatgctgaaaaaatgttcgataatg
tga

KEGG   Scheffersomyces stipitis: PICST_35392
Entry
PICST_35392       CDS       T01023                                 
Symbol
RHO1
Name
(RefSeq) GTP-binding protein, rho subfamily
  KO
K04513  Ras homolog gene family, member A
Organism
pic  Scheffersomyces stipitis
Pathway
pic04011  MAPK signaling pathway - yeast
pic04144  Endocytosis
pic04270  Vascular smooth muscle contraction
pic04510  Focal adhesion
pic04520  Adherens junction
pic04530  Tight junction
pic04625  C-type lectin receptor signaling pathway
pic04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pic00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04011 MAPK signaling pathway - yeast
    PICST_35392 (RHO1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    PICST_35392 (RHO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pic04131]
    PICST_35392 (RHO1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pic04147]
    PICST_35392 (RHO1)
   04031 GTP-binding proteins [BR:pic04031]
    PICST_35392 (RHO1)
Membrane trafficking [BR:pic04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    PICST_35392 (RHO1)
Exosome [BR:pic04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PICST_35392 (RHO1)
  Exosomal proteins of other body fluids (saliva and urine)
   PICST_35392 (RHO1)
  Exosomal proteins of colorectal cancer cells
   PICST_35392 (RHO1)
  Exosomal proteins of bladder cancer cells
   PICST_35392 (RHO1)
GTP-binding proteins [BR:pic04031]
 Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    PICST_35392 (RHO1)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU SRPRB RsgA_GTPase Gtr1_RagA
Other DBs
NCBI-GeneID: 4837721
NCBI-ProteinID: XP_001383320
JGI: 35392
UniProt: A3LQX7
LinkDB
Position
3:176274..176873
AA seq 199 aa
MPAPAEIRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRRVELAL
WDTAGQEDYDRLRPLSYPDSNVILICFSVDSPDSLENVLEKWISEVLHFCQGVPIILVAC
KADLRNDPATIETLRQQQQQPVSTADGQAVAQKISATDYLECSARTGQGVREVFEAATKA
SLSKKESQKSGKKKKCVVL
NT seq 600 nt   +upstreamnt  +downstreamnt
atgcctgctccagctgaaatccgtagaaagttggtcatcgtcggtgatggtgcctgtggt
aagacctgtttattgattgtcttttccaaggggactttcccagaagtatacgttcctact
gtgttcgagaactatgttgctgacgtcgaagttgacggcagaagagtcgaattggcattg
tgggataccgctggtcaagaagattacgacagattgagacccttgtcttatccagactcg
aacgtcattttgatctgtttctcagtggattcgccagactcgctcgagaacgtcttggaa
aagtggatttctgaagtgttgcatttctgccagggagttcctatcatcttggttgcttgt
aaggccgacttgagaaacgaccctgcaactatcgaaaccttgagacaacaacaacaacag
ccagtttccactgctgatggtcaagcagtcgcccaaaagatctccgctaccgattacttg
gaatgttcagccagaactggccaaggtgtcagagaagtgttcgaagctgccaccaaggct
tccttgagcaagaaggaaagtcagaagagtggaaagaagaagaagtgtgttgttttgtaa

KEGG   Scheffersomyces stipitis: PICST_40058
Entry
PICST_40058       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K04513  Ras homolog gene family, member A
Organism
pic  Scheffersomyces stipitis
Pathway
pic04011  MAPK signaling pathway - yeast
pic04144  Endocytosis
pic04270  Vascular smooth muscle contraction
pic04510  Focal adhesion
pic04520  Adherens junction
pic04530  Tight junction
pic04625  C-type lectin receptor signaling pathway
pic04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pic00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04011 MAPK signaling pathway - yeast
    PICST_40058
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    PICST_40058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pic04131]
    PICST_40058
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pic04147]
    PICST_40058
   04031 GTP-binding proteins [BR:pic04031]
    PICST_40058
Membrane trafficking [BR:pic04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    PICST_40058
Exosome [BR:pic04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PICST_40058
  Exosomal proteins of other body fluids (saliva and urine)
   PICST_40058
  Exosomal proteins of colorectal cancer cells
   PICST_40058
  Exosomal proteins of bladder cancer cells
   PICST_40058
GTP-binding proteins [BR:pic04031]
 Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    PICST_40058
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase SRPRB Gtr1_RagA
Other DBs
NCBI-GeneID: 4851672
NCBI-ProteinID: XP_001386816
JGI: 40058
UniProt: A3GHC3
LinkDB
Position
1:2504577..2505173
AA seq 198 aa
MVPPPAELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEIDGTVVELA
LWDTAGQEDYDRLRPLSYPDSNVILICFSVDSPDSLDNVLEKWISEVLHFCQGVPIILVC
CKADLRNDPNVIEQLRQHQQQPVSTSEGQSVAEKIGAYSYLECSARTGQGVREVFETATR
ASLSRKEKKTKKKKCVVL
NT seq 597 nt   +upstreamnt  +downstreamnt
atggttcctcctcctgctgaactccgcagaaagttggttattgtcggtgacggtgcctgc
ggtaagacctgtttgttgattgtcttttccaagggaacgttcccagaagtttatgttccc
acagtgtttgaaaattacgttgctgatgttgagattgatggcactgtagttgaattagcc
ctttgggatacagctggccaggaagattacgacagattgagacccttgtcctacccagac
tccaacgtcatcttgatctgtttctctgttgattcgccagattcgttggataacgtttta
gaaaagtggatttctgaggtgttgcacttctgccaaggtgtccctatcattttggtttgt
tgtaaggctgacttgagaaacgatcctaatgtcattgagcaattgagacaacaccaacaa
caaccagtttcgacctccgagggccaatcagtagctgaaaagattggtgcctattcctac
ttggaatgttctgccagaaccggccagggagtgagagaagtgtttgaaactgccactaga
gcctccttgagcagaaaggaaaagaagacaaagaagaagaagtgtgttgtcttgtaa

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