Scheffersomyces stipitis: PICST_45484
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Entry
PICST_45484 CDS
T01023
Name
(RefSeq) DNA-directed RNA polymerase II regulator
KO
K15174
RNA polymerase II-associated factor 1
Organism
pic
Scheffersomyces stipitis
Pathway
pic04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
PICST_45484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_45484
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PICST_45484
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
DrrA1-3_C
Motif
Other DBs
NCBI-GeneID:
4838449
NCBI-ProteinID:
XP_001384484
JGI:
45484
UniProt:
A3LTQ7
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All DBs
Position
4:complement(<942754..>944124)
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AA seq
456 aa
AA seq
DB search
MSQKPSSKPIRQDYIAKVRYTNNLPPPPLNPKFIQYNTTEQVSSQKEAEYLISSVFRKEN
FTRLMENIDEELGMNLNLINNRGFLDNGDETVINNFVTKDSGNSNSNKSGLVTLHPSDRA
LLRDAGIGKISKSEPGVSFLRRTEYIADMHVAKVNDELEDSKKKKKNTAETHDPEAQLRA
VEDTFDNAQESLTNFARLKHPKKKHLKAVAAWPLLPDTSAMDTKYIAVKFLGSASISREL
QANKRKDKNYNEVLEKNALETAILKPITSDDGEWISFYEVRDANKAVELNSRLNSTERER
PIVNMLDEDVEGQESYKFKHLKNYDMNFNRFTKPYEELSIKFIPEEVGSKKRKVAYYYPV
SGRIDLKKHRSSTNSEINRFLKDSTVDVINFKLREPSTNEIKKMDAIRSEFDPMEYEGEE
EEEDEEDDAQADDARAEDVRDVGEEFNEASKTDEAD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaaaccatcatccaagcctataaggcaggattacattgccaaagtgcgttat
acgaacaacttgcctccaccaccattgaatcctaaattcatacaatataacactacagaa
caggtttcgtcacagaaggaagccgaataccttatttcgtcagtctttagaaaggaaaac
ttcactcgtttgatggagaacatcgacgaggagttaggtatgaacttgaacttgatcaat
aatcgtggctttttggataatggggacgaaacggttatcaacaactttgtaacaaaagac
agtggtaatagtaatagcaacaagagcgggttggtgacgttgcaccctctggatcgggct
ttgttaagagatgctggtatcggcaaaatttccaagtcggagcctggtgtttcgtttttg
agaagaactgagtatatcgccgatatgcatgtagctaaagttaatgatgaacttgaagat
tcgaaaaagaagaagaagaatacagccgagactcatgatcctgaggctcagttacgtgct
gtggaagacacctttgataatgcccaggagtcgttgactaatttcgcacgcttgaagcac
cccaagaagaagcatttgaaggctgtggctgcctggccgttattgccggacacttctgca
atggacacaaagtatattgctgtcaaatttttgggctcagcttctatcagcagagaatta
caagccaacaagagaaaagacaaaaactacaacgaggttttggagaagaatgccttggag
acagctatattgaagccaatcacatctgatgatggagaatggatatcgttttacgaagtt
cgtgacgccaacaaggctgtggaattaaacagccgcttgaactccacagaaagggaacgt
cccattgtcaacatgctagacgaagacgtcgagggccaggaactgtacaagttcaagcat
ttaaagaattatgatatgaacttcaacagattcactaagccctacgaagagttatcaatc
aaatttattccagaagaagtcggatcgaagaagaggaaggtagcatattattacccggtt
tcgggacgtatcgacttgaaaaagcatcgttcctctacaaactcggaaatcaaccgtttc
ctcaaggacagtactgtagacgttatcaacttcaagttacgtgaaccaagcaccaacgaa
attaaaaagatggatgctattagatctgagtttgatccgatggaatacgaaggtgaagaa
gaggaagaggacgaagaggacgatgctcaagctgacgatgctcgagctgaggatgttcgc
gatgttggtgaagaatttaacgaggcttcaaaaacagatgaggccgactaa
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