Scheffersomyces stipitis: PICST_49032
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Entry
PICST_49032 CDS
T01023
Symbol
RIC1
Name
(RefSeq) WD40 repeat protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_49032 (RIC1)
Membrane trafficking [BR:
pic04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
PICST_49032 (RIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
4839984
NCBI-ProteinID:
XP_001385428
JGI:
49032
UniProt:
A3LX40
LinkDB
All DBs
Position
6:396751..399915
Genome browser
AA seq
1054 aa
AA seq
DB search
MVWVSSCPQLSTSLLHHEKILKVIRVPHTPLLIVLTNTTITAYDQNTLLPIASHTRAEDS
VAQHGTNKDIQTKQITVNTAQLLKIHTVNLFVQTEHNYLVIYSVLINHSKSLFEVNNNVN
YELIQTGLPLSSTVEKNSFSRMIKSATKAIVSGNENHVDLENIENFNNVQLEDEEGNFTI
PTVKLSVFKILKIGIGLQNYWLKHNSHNLIIFNNKNERQSSAIQAQEGNYFQIINMQSFR
SEVFQLSDSDWYHSTDPESNISYINYNTEQNYFIFLNDNKELWYFTVEFNDSDLLVPVGH
KIFTFEAIESLENFKISFNPQSNLILIHVNRRIELFKLFTDTSKLVYLKDIKSKGLEKSS
IIWSPCGDYFVLLDDSTGYWSISTKFGSFTFSTTEIIKELDEVYEENRGFLRAAKILIGP
NANSLFIVGHDYSKLYKVNLLAANDSADVFYDHEYLSIIQNNKSFVRFPIQPRVKKIISQ
IERFNGNTSKSTSKSMSGVLNISRNKYNQLAISYGDNISLSTPFSSGGTEFNNILWFNFR
NYYLDAYNIVSQFWFNDYLVIVNRKTKDNFEDETENGKSAANESSAMVDELIVLDTTRFK
YGNGGEELRLDNDSTLWKYDFKTTFIKIQPITISEHVCNVVILTHDLRLIILELNDNKAL
ARKSSSADLKVRGIRRNYKIFIGVNKTIHLLSVQHKLAIKDVIQIGMVDRRHFFFLLKTG
ELFLLKNQTMPTPPSQSTPIGALKPNNMYDLIKIGDTIEFFKFQKLRFNDSLTEYIYVFN
GEELLIYELEDLIENSFDMSTIIIDELEKEKHVFPIPISIETENFQPIILDGVVAPNSLS
VKSLDLVGLENVIVNKLSSGGLVVKTKVARKLVLNNFIENELVKTSNDLEAAVTKYKQFS
NYHYCLELLLFKYLTSDNNNILKRLITLIELNEHSEYIYINCLRKIEVIYWDKFFTILDT
KPVTFMKRLIEINNVELCYNYLIIYLNYKREGEDEDSAADEEALNSNDKEIILKIMKMLD
DSSKWDWCFELCRFIKLLQPSGELLKQIKETLQK
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggtatgggtcagttcatgtccccaactactgacgtcgttgcttcaccatgagaagatc
ttaaaagtgattcgggtgcctcatactccactacttatagttctcacgaatactactata
acagcatatgatcaaaacacattgttaccgatcgcttcacacacacgtgcagaagactca
gtagcgcaacatggtaccaataaagatatacaaacaaagcaaatcacagtgaatacggct
caattgctcaaaatacacacagttaacttgtttgttcaaacagaacataactatttggtg
atctacctggtgttgatcaaccactccaagtccctttttgaagtgaataataatgtgaac
tatgaacttattcaaaccggattgcctttgagtctgactgtggaaaagaactcgttcagc
agaatgataaagtcggccacgaaagcaattgtactgggaaatgaaaatcatgtggatcta
gagaatattgaaaatttcaataatgtgcaattggaagatgaagaaggaaacttcactata
ccgactgtcaaactcagcgtcttcaagatcctcaaaataggaatcggacttcaaaactac
tggcttaaacacaactcacacaacttgattatctttaacaacaaaaatgaacgtcaaagt
tcggcaatacaggcacaagagggtaactacttccaaataattaacatgcaatcattccgc
agtgaagtatttcaactttcagattcagactggtatcatctgactgatcctgaatcgaac
ataagttatatcaactataatactgaacagaattactttatatttctcaacgacaacaag
gaattatggtacttcacagtagaattcaatgacagtgatcttttagtacctgttggacat
aagatattcacttttgaagctatcgagctgcttgaaaacttcaagatctccttcaaccca
cagtcaaacttgatactaatccacgtaaatagaagaatagagctattcaagttattcacg
gatacttctaaacttgtgtatctcaaggatattaaaagtaaaggcttggaaaaatcctca
attatttggtctccatgtggagactatttcgttcttcttgatgattcgactggatattgg
tctatctctactaaatttggaagttttactttcagcactaccgagataattaaagaatta
gacgaagtatatgaagagaacaggggattccttcgagcagcaaagatcttaataggaccc
aatgccaattcccttttcattgttggtcacgattattccaagctatacaaggtaaatttg
ctagccgcaaacgactcagcggacgtcttttatgatcatgagtatttgagcataatacaa
aacaacaagtcatttgttagatttccaatacaacctcgggtaaagaaaataatttctcag
attgaacgattcaatggcaatacatctaaatcaacttcaaagagcatgagtggtgttctc
aatatttcaagaaataagtataatcaattggcaatttcttatggtgacaacatttcatta
tcaactccattctcatcgggtggcactgaattcaacaatatcctttggtttaacttccga
aactattatctagatgcgtacaatattgtttcgcaattctggtttaacgactacttagtt
atagtcaacaggaaaacgaaagataactttgaagatgaaaccgaaaatgggaaatctgct
gccaatgaaagttcggcaatggtagatgagttgattgtgttggatactactcggttcaaa
tatggaaatggaggagaagaattaaggttggacaatgatctgacactatggaaatacgat
ttcaagacaacttttataaagatacaaccgatcacaatctccgaacatgtttgcaatgtt
gttatcttaacgcatgatctcagattgataatcctcgagcttaatgacaacaaggctctt
gctagaaagtcgtcatctgcagacttaaaagttagaggaattcgtagaaattataagata
ttcatcggtgtaaacaaaaccatccatttgctatctgttcaacataaattagctatcaaa
gatgtgattcaaatagggatggttgaccggagacattttttcttcttgttgaaaacagga
gagttgttcttgctcaagaaccaaaccatgccaactcccccatcgcagtcaactcccatc
ggagcactaaaacccaataacatgtatgacttgatcaaaattggagacactattgaattt
ttcaagttccaaaagttgagattcaatgatctgcttactgaatacatctacgttttcaac
ggcgaggaattattgatatacgaattagaagacttgatagaaaattcttttgacatgtca
accataattatagatgaacttgaaaaagaaaagcacgtttttcccattccgatttctatt
gaaaccgagaactttcagccgataatattggatggagtagttgctcctaactcactttca
gttaagtcattggatttggttggcttggaaaatgtaattgtaaacaagttatctagtgga
ggactagttgtaaagacaaaggttgcccggaaattagttttgaataatttcatcgaaaat
gagctcgtcaaaacttcaaatgacttggaggcagcagtcaccaaatacaagcaatttctg
aactatcattattgtttggaattgcttcttttcaagtacctaacgtccgacaacaacaat
atccttaaaaggttgattactcttattgaattgaacgagcattctgaatatatctatatc
aactgcttaagaaagatagaagttatttattgggataagttctttactattcttgatacg
aagccagttacgttcatgaagagattgatcgagatcaacaatgttgagttatgctacaat
tacttgattatatatcttaactacaaaagagaaggtgaagacgaagactctgcagcggac
gaagaagctcttaattccaatgataaagagattattctcaagattatgaagatgttggac
gattcgctgaaatgggactggtgctttgagttgtgcagattcatcaaattgctccaacct
tcaggagaactcttgaaacagatcaaggagacattgcagaagtaa
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