Scheffersomyces stipitis: PICST_61618
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Entry
PICST_61618 CDS
T01023
Symbol
MSD1
Name
(RefSeq) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PICST_61618 (MSD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pic01007
]
PICST_61618 (MSD1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_61618 (MSD1)
03029 Mitochondrial biogenesis [BR:
pic03029
]
PICST_61618 (MSD1)
Enzymes [BR:
pic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PICST_61618 (MSD1)
Amino acid related enzymes [BR:
pic01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PICST_61618 (MSD1)
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PICST_61618 (MSD1)
Prokaryotic type
Other AARSs
PICST_61618 (MSD1)
Mitochondrial biogenesis [BR:
pic03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PICST_61618 (MSD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
4840358
NCBI-ProteinID:
XP_001385831
JGI:
61618
UniProt:
A3LXG1
LinkDB
All DBs
Position
6:complement(669001..671007)
Genome browser
AA seq
668 aa
AA seq
DB search
TSLPDKELTLAKFDFPLATHSIRKVTYKLDSFLDDKSIKVTINGHINRKPRIRPELSFAE
IRDSNGDCTQILLTPQTTSSKLFDLLKTTTVEDAVSVTGHVQLKKMKPGDATREWELVVD
NLQILNSSNLDAARLDKLKHSNPEQLPPQFRYLQLRTKFYQNALKTRSKVAMLIRNIFTE
NHEFTEIETPLLFKSTPEGAREFLVPTRSPDKFYALPQSPQQYKQILMSSGFTRYFQIAK
CFRDEDLRADRQPEFTQVDLEMAYVNNCDQVGVVVEDLIHNVWNRIRNISTYRVNEQGYL
EAIDFDSTKPNSSLHFGKLKYIDALCKYGIDKPDLRSKLEFVNLSELFIPSSTNNGQFPV
LEACILKKAFEPSKGKYKLPRSLIDPLSYTRRKPIVIPIQDENDATNWYKKFIEKKVFSE
AATFSEHKLQASLDLEAGDILAFSTRAELPYENPTPLGKFRQLAINEFPEKWNREIYDKS
SGTISEVKDTSAIFVGSWVVEFPLFSPVEISSSSNNDFPEYDFTSFESTHHPFTMAKHED
YDLLETAPLKVRGEHYDLVINGVEVGGGSRRIHDAELQKFVFKNILNITNYNDLFGHLLH
ALSMGCPPHAGLALGFDRLCAMLLGSASIRDVIAFPKNQSGFDPVVESPTSVSESTLNQY
YITTKLNS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
acttctcttccagacaaagagcttactttagctaagtttgactttccattggctacccac
tccataagaaaagtgacctataaactagattcatttcttgatgacaagtcgataaaggta
actataaacggacacatcaacagaaagccgagaatccggcccgagttgagttttgctgaa
atcagagactccaatggtgattgtacccagatactcttgactccccagactaccagcagc
aaattgtttgatttgctcaaaacgacaacagtagaagatgcagttagtgtcacaggacac
gttcaacttaagaaaatgaagccaggagatgccacccgtgaatgggaattggtggtagat
aatttacagatactcaattcctctaacttggatgcagccagattggacaaattgaaacat
tccaatccggagcaattacctccacaattcagatatttacaattaagaacgaaattctac
cagaatgccttgaaaaccagaagcaaggttgccatgttgataaggaatatcttcaccgag
aatcatgagttcacagaaatagaaactcctcttcttttcaagtctactccggagggagct
agagaatttcttgtaccaaccagatcgccagacaaattctatgctttgcctcagtcacct
cagcaatataagcaaattttaatgagctcagggttcaccagatacttccaaattgccaaa
tgtttcagagacgaggatttgagggctgacagacaaccagaattcactcaggtagacttg
gaaatggcttatgtcaataattgcgaccaagtcggcgtagttgtggaagatttgattcat
aatgtgtggaacaggatcagaaatatatctacttacagagtcaatgaacaagggtatctt
gaagctattgacttcgattcaacaaaaccaaattcttctttgcatttcggtaaactaaag
tacattgatgccttgtgcaaatatggaattgataagcctgaccttcggtcaaagttagaa
tttgtcaaccttagtgaattgttcattccctcaagcactaacaatggacaatttccggtg
cttgaagcgtgtatcttaaaaaaggcttttgagccatctaaaggaaaatacaaattgcct
cgttcattaatcgatcctttgagctatacaagaaggaaacccattgtgattccgatacaa
gatgagaacgatgctaccaactggtacaagaagtttattgaaaaaaaagttttctctgaa
gctgcaacctttagcgaacacaaacttcaggcaagcttagacttggaagctggagatata
cttgctttttctactagagctgaattgccttacgaaaaccccactcctttaggtaaattc
agacagcttgccattaatgagttccctgagaagtggaatcgtgaaatatacgacaagagc
ctgggaactatctccgaagtcaaggacacttctgctatctttgttggctcctgggttgtt
gaatttccgttgtttagtccagtggaaatttcctccagttcgaacaatgatttccctgaa
tacgactttacctctttcgagtccacccatcatccgtttacaatggcaaaacatgaagac
tacgatcttttggaaacagcgcctttgaaggtgagaggtgagcattacgatcttgttatc
aatggtgttgaggtaggaggtggctccagaagaatccacgatgccgaacttcagaagttt
gtattcaagaatatcttgaacatcaccaactacaatgatttgtttggccatcttctccat
gcattgagtatgggatgtcctcctcatgctgggttggccttgggattcgatagattatgt
gccatgctacttggaagcgcaagcatccgtgatgtaatcgcatttcctaagaaccagtct
ggtttcgatcctgttgtagaaagtcctacttcggtttctgaatccactttaaatcaatac
tacattacgaccaaattgaattcatga
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