Scheffersomyces stipitis: PICST_67388
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Entry
PICST_67388 CDS
T01023
Name
(RefSeq) predicted protein
KO
K18718
nucleoporin NUP60
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_67388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_67388
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_67388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6174
Motif
Other DBs
NCBI-GeneID:
4837766
NCBI-ProteinID:
XP_001383558
JGI:
67388
UniProt:
A3LS94
LinkDB
All DBs
Position
3:1399671..1401059
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AA seq
448 aa
AA seq
DB search
MDNRKVYSSYRDRIRSISVPYRNQNGFLSKVKSLFNSSINEGKPSEDSSLSSEAQTSKID
TPLKRKSESLAVESTTANEILSSFFKEKGDRNLTEVEYEGVMALLSKSRANTPVKRQRLN
QDFGNDTENSILNEKSLPPRSAAVDISKVFATPSAQKTLRNVNATMIHDQSSLITDYSPV
YHTINESFGNRSISSVKRVYQFSGLPSPYRTRIRAPKSSSLRSSKSKTSSNDVQMNLRKE
KSITNKSINTSAIHKPRSAAATTLLSILDGKQTDSEDNVNPTKANIGRFSNPYSSQPSIK
KMNKIETVNNTHKNTITANDINKTISYDKSQTLPTTIKLDDTFPKSKTNLTHRTEARVEN
VQIPNKTNGYPAFKANGTSTNSIPSVLPTVKNAIPKENINFSSKTTKSSIPNFSPEPAES
EYEFPELTPIEVGLDAAKVIQYEMLFNF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggacaatagaaaggtgtacagctcctacagggacagaataagaagtatttctgtacct
taccgaaatcaaaatggatttctttcaaaagttaagagccttttcaacagcagtatcaat
gaaggaaaaccaagtgaagactcatcattatcttcagaagcccaaacatcaaagattgat
actcctttgaagaggaaaagcgaaagtcttgctgtagaatcaacaactgcgaatgaaatt
ttatcgtcattcttcaaagagaagggagaccgaaacttgacagaagtagaatatgaaggc
gttatggctcttttgtccaagtcaagagccaatactcccgtaaagagacagaggctaaac
caagatttcggaaatgacacagaaaattcaattttgaatgaaaaaagtttgccaccacgt
tctgctgcagtcgatattctgaaagtatttgctaccccttctgctcagaagactttaaga
aatgttaacgctacaatgatccacgaccagtcttcccttattacagattatagccccgta
taccacaccattaacgaaagttttggtaacagaagtatttcatctgtcaaacgtgtctat
caattctcaggattgccatcgccatatagaacaagaataagagcccccaagtcatcatct
ttgagatcgtctaaatccaaaacttcatcaaatgatgtccaaatgaatctaaggaaagag
aagagcattaccaacaagtcgattaatacttcagccatccacaagccgcgcagtgcagct
gcaacaacgttgctttcaattctagatggaaaacagacagatagtgaagataatgtcaat
cctacgaaggcaaacatagggcgcttttcaaatccgtactcgtcgcaaccgtcgataaag
aagatgaataagatcgaaaccgtcaataatacacataaaaacacgatcactgcaaatgat
ataaacaaaactatatcgtatgataaatcacaaactttgccaacaacaataaaacttgat
gatactttcccgaagagtaagactaatttaacccataggactgaagcaagagtggaaaat
gtacaaataccaaataaaacaaacggttatccagcattcaaggcaaatggtactagtacc
aatagtatcccatcagttttaccaactgtcaaaaatgctataccaaaggaaaatatcaat
tttagcctgaaaacaacaaaatctagcattcctaacttttcgccagaacctgctgaaagt
gaatatgaattcccagaattgacaccaatagaagtgggcttggatgctgctaaagttatt
cagtatgagatgctattcaatttttaa
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