Scheffersomyces stipitis: PICST_80363
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Entry
PICST_80363 CDS
T01023
Symbol
NPL4
Name
(RefSeq) nuclear protein localization factor and ER translocation component
KO
K14015
nuclear protein localization protein 4
Organism
pic
Scheffersomyces stipitis
Pathway
pic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PICST_80363 (NPL4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_80363 (NPL4)
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
PICST_80363 (NPL4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
Med31
Motif
Other DBs
NCBI-GeneID:
4851120
NCBI-ProteinID:
XP_001387827
JGI:
80363
UniProt:
A3GFS1
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Position
1:complement(977986..979927)
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AA seq
577 aa
AA seq
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MSVTLRFRSREGTFRVAANPDADFLLVLEQLLSKISIEDVQNLYLSDKPNSKGELANGLC
GKTVTELGLKNGDMLYASYEAATGSNPDSTTNITTSTNNHNSGSISIGHISIPTTTSGPR
KVTQLPVDDVLEKDEGLIKRPLTKFCRHGAKGMCEFCSPLPPWDANYRKENAIKHMSYHA
YLKELNELKNSKHNSSSYIAPLEEPNYSILLNCNEGHQPYPKGICSKCQPPPITLQLQKF
RMVDHVEFATSSIMNNFIDVWRHTGVQRFGVMYGRYEPFDKVPLGIKAVVEAIYEPPQSG
ELDGITMLPWENEAEVDAIASELGIYKVGVVFTDLTDSGQKNGTVLCKRHKDSYFLSNLE
ILMAARNQIQHANITKFSSSGQFSSKFVTCVISGGLNGEIEPRSYQVSTSAEALVRADII
TGSTQPSRLYVNSSNDRRYVPDVAYSELNEYGLEVKSNAKPTFPVDFLLVSLTDSFPVNP
TPMFDTDSNFVIENRDFFNELQNLHAVSKYLNADTSGKGTSLCNFHFLVYLKRTNILGAQ
EFDLLLRFVRERQYEDYLHLVESPGWMTLITILEQST
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacacttcgtttcaggtcccgcgaaggcactttcagggtagcagcaaatccg
gatgctgattttcttcttgttctagagcagcttctctccaagatctccatagaagatgta
caaaacctctaccttagcgacaaacccaattccaaaggcgaattggccaatggtctctgt
ggaaaaaccgtaacagagttgggtttgaagaatggagacatgttatatgccagctacgaa
gctgctactggatctaatcctgattctactaccaatattacaacctctactaataatcat
aattctggatccatttccatcggtcacatttccattccaacaacgacatcaggaccacgt
aaagtgacccaattacctgtagacgatgttcttgagaaagacgaaggtttgatcaagaga
cctcttaccaaattctgcagacatggagctaaaggcatgtgcgagttctgttcgccacta
cctccatgggatgccaactaccgtaaggaaaatgccatcaagcacatgtcgtaccacgca
tacttgaaggaactcaacgaattgaaaaacagtaagcacaactcgtcgtcgtatatcgca
cctttggaagagcctaactattctatcttattgaattgtaatgagggccaccagccctat
ccaaagggaatttgttctaaatgtcagcctcctccgatcacattacaattgcagaaattt
agaatggtggatcacgtagaatttgccacctcttccatcatgaacaacttcatcgacgta
tggagacacacaggcgttcaaagatttggggtgatgtacggcagatatgaaccttttgac
aaagttcctttaggaattaaagctgtagtcgaagccatctacgaacctccccaatctggc
gagttggacggaatcaccatgttaccgtgggagaacgaggctgaagtagatgcaattgcc
ctggaattggggatctataaagtgggcgtggttttcacggatttgaccgactcgggccag
aaaaatggtaccgtgttatgtaaaagacacaaggatagctatttcttgtcgaatctcgag
atcttgatggctgcacgcaaccagatccagcatgccaacatcacgaagttttcatctagt
ggccaattttcttcaaagttcgttacatgtgtcatcagcggagggttgaatggagaaatc
gagccccgttcatatcaagtttctaccagtgcagaagcattggtaagagcagatatcatt
actggctccacgcaaccctctagattgtatgttaattccagcaatgataggagatacgtt
cctgacgtagcatatctggagcttaacgagtatggactcgaagtcaagtctaacgccaag
ccaactttccccgtagacttcttgttggtgtcattgacggattcgttccctgtgaatcct
acacctatgtttgataccgacagcaactttgtcattgaaaatagagacttcttcaacgaa
ctccagaacctccatgctgtcagcaagtacttgaacgcggacactagtggcaagggaacg
agtctctgtaactttcatttcttggtatacttgaaacgcacaaacattcttggggcacaa
gagtttgatctcttgttgcggtttgtcagggaaagacagtacgaagattatttgcatttg
gtggagagtcctggctggatgacgttgatcacgatcttggaacagagcacgtag
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