Phytophthora infestans: PITG_08997
Help
Entry
PITG_08997 CDS
T01333
Name
(RefSeq) ATP-dependent RNA helicase DBP5, putative
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pif
Phytophthora infestans
Pathway
pif03013
Nucleocytoplasmic transport
pif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PITG_08997
03015 mRNA surveillance pathway
PITG_08997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_08997
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PITG_08997
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PITG_08997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
9462488
NCBI-ProteinID:
XP_002903028
UniProt:
D0NDP1
LinkDB
All DBs
AA seq
458 aa
AA seq
DB search
MSETDAAAKTTEEVAPPVETENKTEDAVEEVTQSLEDILALGQGLDDEDYKAELEVLQND
PNSNLYSAVTFEELNLPDPLLKGVYNMKFAKPSKIQSVALPLILADPPENLIGQAQSGSG
KTATFALGMLYRVDVNLKAPQAVCVGPTRELVRQIMAVVNAMGKFLGVETFLAIPGNDLA
RGETLKAQVIVGTPGKIEGMIKKKQLDTREVKIFVLDEADVMVAEDGMRERSVSIKRFIK
NRACQYLLFSATYADDVRDFAQKMVPDHNIITVKKEKLTLDGIKQFWIDCKTRDNKFQVL
SDIFAILSIGKCVIFVQQRDTAKELTRRMREKGHSVGILHGADMAKEVRDQVIDEFRAGT
TNVLITTNVLARGIDVAGVSLVVNFDIPLTRDHRPDPETYLHRIGRTGRFGRKGCAINFV
YDNKSKQDLAEIEEYYARPITQAPADDIEELEKLLAWE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacggacgctgctgcgaagacgacggaggaggtcgcgccgcccgttgagacg
gaaaataagaccgaagatgcagtagaggaggtcacgcagtcgctggaagacatcttggcg
cttggtcagggtctggacgacgaggactacaaggccgagctcgaagtgctgcagaacgac
cccaactccaacctctactcggccgtcacctttgaggaactcaacctgccggacccgctg
ctcaagggcgtgtacaacatgaaattcgccaagccttccaagattcagtctgtggcactg
ccacttatcctcgccgatcctccagagaacctgatcggccaggctcagagtggcagtggc
aagaccgctacctttgctctaggtatgctctaccgcgtggacgttaacctcaaggctccc
caagctgtctgtgtggggcccacacgtgagttagtgcgtcaaattatggctgtagtgaac
gctatgggcaagttcctcggcgtggagacgttcctggccatccccggcaacgacctggct
cgtggtgagactctgaaggcacaggtgatcgtcggcacgcccggtaagatcgagggaatg
atcaagaagaaacaactggacactcgtgaagtcaagatcttcgtactggacgaggctgac
gtcatggtggccgaagacggcatgcgcgaacgctcggtgtctatcaagcgattcatcaag
aaccgtgcctgtcaatacctgctcttctcagccacatacgccgacgatgtgcgtgatttc
gcccagaaaatggtgcccgaccacaacattatcaccgtcaagaaggagaaactcacgctg
gacggcatcaagcagttctggatcgactgcaagacccgcgacaacaagttccaagtcttg
tcggacattttcgccatcctgagtatcggcaagtgcgtcatcttcgtgcagcaacgtgac
actgccaaggaattgacgcgtcggatgcgtgagaagggccactcggtcggcattttacac
ggtgccgacatggccaaggaggtgcgcgaccaggtcatcgacgagttccgtgccggcacg
accaacgtgctgatcaccacgaacgttctggcgcgtggtatcgacgtggcgggcgtctcg
ttggtcgtcaactttgacatcccgctgactcgtgaccaccgtcccgacccggagacgtat
ctgcaccgtatcgggcgtaccggtcggttcggccgcaaaggttgcgctattaacttcgtg
tacgacaacaagagcaagcaggacctcgccgagatcgaagagtactacgcacgtccgatt
acgcaggcccctgcagacgatatcgaggaactcgagaagctactagcttgggaataa
DBGET
integrated database retrieval system
