Phytophthora infestans: PITG_13460
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Entry
PITG_13460 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
pif
Phytophthora infestans
Pathway
pif03013
Nucleocytoplasmic transport
pif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PITG_13460
09122 Translation
03013 Nucleocytoplasmic transport
PITG_13460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_13460
03041 Spliceosome [BR:
pif03041
]
PITG_13460
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
PITG_13460
Spliceosome [BR:
pif03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PITG_13460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
9461877
NCBI-ProteinID:
XP_002899690
UniProt:
D0NM23
LinkDB
All DBs
AA seq
720 aa
AA seq
DB search
MAETDGAALKQLQATCSALKEEMTAMYEQRRGRSSDEGRLKQRRWRVLLLLSAMKSGLRD
TFLEADARRTRVQEQKDVAEAHQLQLQNLLYEKDHLLREIRRCRGFSTKEMDKIEFADGP
LPIKVDPDVHRQHLDQLTQELHARKSLQTELKELKLKITKVEDATETKQAFLNALPDHLA
GIEAATTGLQKYMGEPVTAQRNRHHAAGTELSTPLYALYCELEAYQTASGDAGKRLQLEI
VDSIGVKHTGAYRKRGFPTALERQEHASTKRLKAPSRSPSASLNGATPPHSRAPSRSPSV
KRVADSSSQEPESGEIVAAHTAEKLLQLRPHEEETKEETKDQDENSEAATSQKLWNPHAR
ALQLTISVTVPMDTDKNGTTTKTVSGSFTVMFQYFPVAKMVTAEVVKTAPAGFYPGSQRC
MLTNLFPGDDGLTVPQVAVNYTFQEDSDERTEVEFPASAACRPYYWTQWICGLNPMKRPD
VDAIDETPRRPEPSVRNVMNQLVNRFVATVVLKKQLDQLTKSRPEDEGVSFVHPLARHLF
PHEVKSHLEEWKEVPTPTQDMFHLFNESATLSTRPRAQFHLSTSDCRYFRVGVKNGHAKV
SAIVEISPEYPVRAPRFLFQPRLTTISKAMDKDQLPVYENQLKEVEVEVNAYYDELIPKG
SEHFLLLHQLRKIEMCFDVLCNAAADGNADVSLCFGRERRGKDRRQAMVMDTAAKELRHR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacggatggggccgcgctgaagcagctccaagcaacgtgctccgcgctcaaa
gaggagatgacggcaatgtatgaacagcgaaggggaaggagctccgatgaggggcgtctg
aagcagcgacgctggcgtgtgttgctccttctgagcgctatgaagagcggactgcgggac
acctttttggaggcggatgctcgccgtacacgcgtccaggagcagaaggacgtggcggaa
gcgcatcagctgcagctacagaacttactatacgagaaagatcatctgttgcgtgaaatc
cgacgctgtagaggcttcagtaccaaggaaatggacaagatcgagttcgcagatggccct
ctccccattaaagtggacccggacgtgcatcgtcagcatctagaccaactcacacaagaa
ctacacgctcgtaaaagtctccagacggaactaaaggagcttaagctcaaaattaccaag
gtagaagacgccacagagaccaaacaggccttcttgaacgctctacccgaccatttagcg
ggtattgaagctgccaccactggactacagaaatacatgggagaacccgtcaccgcgcaa
cgtaatcgacaccacgcagcggggacagagctgtcgacgccactgtatgcgctctactgc
gagctggaagcctatcaaacggcaagtggggatgccggcaagcgactgcagcttgagatc
gtggactcgatcggtgttaaacacactggcgcgtaccgtaagcgtggctttcctacagct
ttagagcgacaggaacacgcgtcaacgaagagactgaaggctccgtcccgctctccttct
gcaagtttgaatggagctacgccacctcacagtcgtgcgccgtctcgctccccgtccgtc
aaacgtgtagcggactcgtcatctcaagagccagagagtggggagatcgtggctgcacac
acagctgagaagctactgcagctgcgtcctcatgaagaagagaccaaggaagagaccaag
gaccaggacgagaactcggaagctgcgacctctcaaaaattatggaacccccatgcgagg
gcgttgcagttaaccatatcagttacagttccaatggataccgataagaacgggacgact
accaagacggtctcggggtcgttcactgtcatgttccagtacttccctgtagccaaaatg
gtcactgcggaggtcgtcaagacagctcctgctggcttttaccccggcagtcaacgctgc
atgttgacgaatcttttcccaggcgacgatggcctcactgtgcctcaagtggctgttaac
tatacttttcaagaagacagcgacgaacggacagaggtggagttcccagcgagtgctgca
tgtcgtccgtactattggacgcagtggatctgcggtctaaaccccatgaagcgtccagac
gtggacgctattgacgagacgcctcgtcgacccgagccatcggttcgtaacgttatgaac
caactggttaaccgtttcgtggctacagtagtactgaagaaacagctggatcagctaacc
aagtcacgaccggaagatgaaggcgtgagtttcgtgcacccattggcgcgtcacctcttc
ccacacgaggtgaagtcgcatcttgaggagtggaaggaggtcccgacgccgacacaagat
atgttccatctcttcaacgagagtgcaacgctgtccactcgtccacgtgcgcagttccat
ctgtctacaagtgactgtcgctacttccgtgtcggcgttaagaacggccacgcgaaggtc
tctgctattgtcgagatctcaccggagtatcctgtacgtgccccacgcttcctgttccaa
cctcgattgactacgatcagtaaggcgatggacaaggatcaacttcctgtctacgagaac
caactcaaggaagttgaagtcgaagttaacgcctattacgacgagttgatccctaagggc
agcgagcatttcctgcttctacatcaactccggaagatcgaaatgtgcttcgacgtgctg
tgtaatgctgcagctgatggcaacgcagacgtgtcgctgtgtttcggtcgtgaacgtcgc
ggtaaggaccgtcgtcaagcaatggttatggacacggccgccaaggaactacgtcacaga
taa
DBGET
integrated database retrieval system
