KEGG   Phytophthora infestans: PITG_20611
Entry
PITG_20611        CDS       T01333                                 
Name
(RefSeq) nucleoporin-like protein
  KO
K14299  nucleoporin SEH1
Organism
pif  Phytophthora infestans
Pathway
pif03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PITG_20611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pif03019]
    PITG_20611
   04131 Membrane trafficking [BR:pif04131]
    PITG_20611
Messenger RNA biogenesis [BR:pif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PITG_20611
Membrane trafficking [BR:pif04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    PITG_20611
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_EIPR1 EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_1st ASA1 Beta-prop_WDR35_TULP_N Beta-prop_HPS5
Other DBs
NCBI-GeneID: 9480268
NCBI-ProteinID: XP_002895620
UniProt: D0P258
LinkDB
AA seq 345 aa
MNAMKIFRRFPSQHSDFVHDMSFDFYGKRLATCSSDRKIKIWEEHGQDWRLEYEWNAHQA
SVWKVEWAHPEFGQILASCSFDRTVSIWEDQGLYLNVSASSTDPAATNGGSPSTSSGSKE
GWRNQAQLVDARDSVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQEEFLA
DKDGATCVSWNKSRFDVPMIVVGGNSEVAKVWGYNNSYRRWQVVAELVGHTDAIHDVCWA
PNMGRTSHLLATASKDRTVRIWRLTIQEDDHLQADVEEVARKHHHDSEVWRVEWNVTGTM
LASSGDDGTVRMWKSDFEGNWACVNTISGDLGPVLAPPPMDLQTS
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgaacgcaatgaaaatcttccgtcgattcccgtcgcagcactcggatttcgtgcacgac
atgagctttgacttctacgggaagcgcttagccacgtgcagctcggaccgcaagatcaaa
atctgggaggagcacggtcaggactggcgccttgagtacgagtggaacgcgcatcaggcc
agtgtatggaaggtggagtgggcgcatccagagttcggccagatcctggcttcttgctcc
ttcgaccgtacagtgtctatttgggaggaccagggcttgtatctcaacgtttcagcgtcc
tccacggacccagcggccacgaatggggggagtccatccaccagttccggcagtaaggaa
ggatggcgcaaccaagcgcagctagtggacgcccgggactcggtacacgacgttaaattc
gcccccaggcatctgggactgcggcttgcgacagcatcagaggacggctttgtgcgtatg
tacgaggccatcgacgttatgaacttatcgcattggccgctgcaggaggagttcctagct
gacaaggacggggcgacgtgtgtgtcgtggaataagtcgcgattcgatgtcccaatgatc
gtcgtaggcggcaacagcgaggtggccaaagtatggggatacaacaactcgtaccgccgg
tggcaggtcgtagcggagcttgtaggccacacagacgccatccacgacgtttgctgggct
ccgaatatggggcgcacgtcgcacttattggcaaccgccagtaaggaccgtaccgtgcgt
atttggcgtctaacaattcaggaagatgatcacttgcaggcagatgtagaggaggtggca
cgcaaacaccatcacgactcggaagtctggcgcgtggagtggaacgttactggtacgatg
ctggcttcttcaggtgacgatggcactgtgcgtatgtggaagagcgactttgaaggcaat
tgggcctgcgtgaatacgatctccggagaccttggccctgtattggctccacccccgatg
gacttgcagacaagttaa

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