Psychromonas ingrahamii: Ping_3334
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Entry
Ping_3334 CDS
T00450
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pin
Psychromonas ingrahamii
Pathway
pin00300
Lysine biosynthesis
pin00470
D-Amino acid metabolism
pin01100
Metabolic pathways
pin01110
Biosynthesis of secondary metabolites
pin01120
Microbial metabolism in diverse environments
pin01230
Biosynthesis of amino acids
Module
pin_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ping_3334
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ping_3334
Enzymes [BR:
pin01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Ping_3334
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
DUF5498
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ABM05021
UniProt:
A1SZV6
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All DBs
Position
complement(4119944..4121092)
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AA seq
382 aa
AA seq
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MQFIPFVKYTSCGNSFVIVDETEQSLLSEDDMSRFAFQATNISFGVGCDNLLIIQRCNEL
SLQSINRSRDYWIQPPQEEQAEFVFRMFEPSGEEALCCGNGLMCIASYLLDKHGISSASI
MTEIPLATPKVIKIGTDQNRVGSWVNLGHPRLTPPELVNGEYAALVDPAIHEMQELVVKF
RADDLKAYTTDNELRIRALLVFTGEPHLVIFPDSDFSAPEQADYIFAGSNQGVERRESFG
SWLVEHIGNYMNNHMRHIFPAGINVNFARRLASGVIENRCFERGINRETLACGTGALAVA
YIYSQMHKLNISEVDVLPHRCCWHDKKAKICIKQNSDGWQISSDPVMLFDAVYRFPRKKN
SLPELLNKDHDEIVTEDRKLAV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttattcctttcgttaaatatacatcctgtggcaatagttttgttattgtcgat
gagaccgagcagagtttgctcagcgaggatgatatgtcccgtttcgcattccaggcgacc
aacatcagtttcggtgtaggttgtgataatttgctgattattcagcgttgtaatgaattg
tcactgcaatcgattaatcgtagccgggactactggatacaacctccacaggaagaacag
gctgaatttgtgtttcgaatgtttgaaccgtcgggggaagaagcgctgtgctgcggtaac
ggtctgatgtgtatcgccagttatttattggacaaacatggtataagcagcgcttccata
atgaccgagatccctctggcaacacctaaggttatcaaaatcggtacagatcagaatcga
gttggcagttgggttaatctcgggcatccgcgtttaacgccaccggaattggtgaacggg
gagtatgcagcgttggttgatccggccattcatgagatgcaggaactggtcgttaagttt
cgcgctgatgatctgaaggcttacacaaccgataacgagttacgtatcagagcattgctg
gtgtttaccggtgaaccccatctggtgatattccccgatagtgacttttcagcaccggag
caggcggactatatttttgcaggttccaaccagggcgtggagcgtcgcgaaagcttcgga
tcctggctggtagagcatatcggcaattatatgaacaatcatatgcggcatatcttcccc
gcgggtatcaatgttaattttgcccgtcgtcttgcctccggggtgatagaaaaccgttgt
tttgaacggggcatcaatagagaaaccctggcttgtgggaccggtgcattagcggtagcc
tatatctatagtcaaatgcacaagctgaatatctcagaagttgatgtattaccccatcgg
tgttgttggcatgataagaaagctaaaatttgtattaaacagaattctgacgggtggcag
atcagctctgatccggttatgttattcgatgctgtgtaccgttttccacgaaaaaagaac
agcttgccagaattattaaataaggaccatgatgagatagttactgaagaccggaaacta
gcggtttaa
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