KEGG   Pediococcus inopinatus: PI20285_08645
Entry
PI20285_08645     CDS       T05337                                 
Name
(GenBank) type II CRISPR-associated endonuclease Cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
pio  Pediococcus inopinatus
Brite
KEGG Orthology (KO) [BR:pio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pio03400]
    PI20285_08645
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pio02048]
    PI20285_08645
DNA repair and recombination proteins [BR:pio03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     PI20285_08645
Prokaryotic defense system [BR:pio02048]
 CRISPR-Cas system
  Universal Cas proteins
   PI20285_08645
SSDB
Motif
Pfam: Cas_Cas1 NUDE_C
Other DBs
NCBI-ProteinID: AVL00699
UniProt: A0A0R2I8R9
LinkDB
Position
complement(1724146..1725048)
AA seq 300 aa
MGWRTVVVTQHAKISYSGHCVVVQTQDGTNQIPVSDIQILLISTTRAVITSAVISELAKH
QSKVIFTDNSGEPVTETMDYYPNNRDPQLLQIQFNWDKERKISLWTKIVIQKITNQIYVA
ESLKIETQDLKDELAKLEVDDVTNREAVVARKYFSLLFESESSRRDFSPVNAALNYGYAI
ILSAVNREIVTNGYLTQLGIHHHSQENNFNLGSDLMEPFRPIIDWWVKQKQFNEFTPDIK
FGLVGLLDIEMKYNGENTILRNAISKHVTNCLKYLSGETDNIKIEVEISEVSNNAINGHV
NT seq 903 nt   +upstreamnt  +downstreamnt
atgggatggcgaacagtggttgtgactcaacatgctaagatttcttattccggtcattgt
gtggttgttcaaacacaagacgggactaatcaaattccagttagtgatattcaaatattg
ttaatcagcacgacaagagcggtaataacaagtgccgtaattagtgaactagctaaacat
caaagcaaagtgatttttacggataacagcggtgaacctgtaacagaaactatggattat
tatccaaataatcgcgatccacaattactacagatacagtttaattgggataaggaacga
aaaatatcgttatggacaaaaatagttatacagaaaataactaatcagatatatgtagct
gaatctttaaaaattgagacccaagatttaaaagatgaacttgctaagttggaagtggat
gacgttacaaatcgtgaggcagtagtggcgcgcaagtatttttcgctgttgtttgaatcc
gagtcttcgcgtcgagattttagtcccgtaaatgcggctttaaattatggttatgccatt
attctgtctgctgttaatcgtgaaatagtaactaatggttatttaacgcaattgggaatt
catcaccatagtcaagaaaataattttaatttgggatcagatttaatggaaccctttcga
ccaattattgattggtgggtaaaacaaaagcaatttaatgaatttacccctgatattaaa
tttggtttagtaggattattggatattgaaatgaaatacaacggcgagaatacaatatta
agaaatgcgatctcaaagcatgtaactaattgtttaaagtatttgagtggtgagacagac
aatatcaagattgaggtggaaataagtgaggtatcgaataatgcgattaatggtcatgtt
tga

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