Pediococcus inopinatus: PI20285_09280
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Entry
PI20285_09280 CDS
T05337
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pio
Pediococcus inopinatus
Pathway
pio03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PI20285_09280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_09280
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PI20285_09280
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PI20285_09280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_21
DnaJ_CXXCXGXG
nSTAND1
AAA_29
AAA_25
AAA_15
RsgA_GTPase
AAA_16
DUF4350
ATPase
nSTAND3
NACHT
AAA_23
cobW
Anti-TRAP
Viral_helicase1
YobI-ATPase
Motif
Other DBs
NCBI-ProteinID:
AVL00818
UniProt:
A0A0R2I7X5
LinkDB
All DBs
Position
complement(1869504..1872017)
Genome browser
AA seq
837 aa
AA seq
DB search
MAIQHKETIPDNIEVIGAHVNNLKNLNVTIPLNAFVAITGKSGSGKSSLAMGVLYAEGAR
RYLNSLSTYTRRRISQAGKADVDEVKYLPSALALRQRPTVPGVRSTVGTMTESLNVLRLM
FSRLGSHVCPNGHRVPPTLEVAENMGYVICPTCGVKFMAPGAESFAFNSEGACPTCNGVG
KVRQIVKSRLIPDETKTIREGAVASWRLPGRNFMIYVAEQIGIPIDTPFNQMSAEDQEMV
WHGENKKYAINIPSKTGKIFHMDNAQFENAYSAVEDSLATTTNERAIKRLNRFYSFDICP
TCHGTRFAPKLLNTKLVDKDISEVSKMTITELTQFMPKIVPWLPETMHELGANLVGELQD
SVQPVLDLGLDYLTLDREGDTLSTGELQRIQLGRTLRSQTTGVLYVLDEPSVGLHPANVS
GLIKILHQLVAQGNSLVVVDHDTRIISAADYVIEIGPGAGKNGGTVVDQGTVSTIKQSPQ
SLIAPFLNGTAQLLVRKQVPKAKLFDKGDLTIGVSDRYNLHNVVAHFPKGRLSVVAGFSG
AGKTTLILDSLIPAIKAAIKKEPLPAHISQLDRAHIHRVVMVDSVPVGKNVRSTVATYSG
ILDTLRALFADTPEAKQRKWTASNFSYNVASGACPNCKGTGTISLDIQYLPDMVETCPVC
HGKRYNDETLAVKWHGYTIADILALNVEHALPIFKGVPAIKSILEKLDEMGLGYLVLGES
TPILSGGEAQRLKLVSQMGRKQSGTLFVFDEPSVGLHPLDIQTLIHVFDRLIDQGATIII
IEHDLDVIANADYVVDLGPKGGQFGGKIIAAGTPKEVANTPQSETGKYLKPHFELFQ
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcaacataaagaaacgattcccgataacattgaagtaattggggcgcatgtt
aataatttaaaaaatttgaacgtgacaattccgctaaacgcatttgtagcgattacggga
aaatcaggatcaggaaaatcctcactagcgatgggtgttctttatgctgaaggggcccgc
cgttatttaaattctctttcaacctatacgcgacgccggattagtcaggctggcaaagct
gatgttgatgaagtgaagtatttgccctctgcattggcgttaaggcaacgaccaaccgtt
cctggcgttcgttcaactgttggaacaatgacagagagtttaaacgttctgcgtctgatg
ttttcacgattaggttcgcatgtttgtcccaatgggcatcgtgtgccaccaactttagaa
gttgcagaaaatatgggctacgtaatttgtccgacttgtggagtgaaattcatggcaccc
ggtgcagaaagttttgcgttcaactcagaaggtgcctgcccaacttgtaatggtgtcggt
aaagtccgccagattgtaaaaagccggttgatccctgatgaaacgaaaaccattcgtgag
ggggcggtggcttcatggcgattgccaggccgtaattttatgatttatgtggctgaacag
attgggattccaattgatacgccatttaatcaaatgagtgcggaagatcaagaaatggtt
tggcatggtgaaaataaaaaatatgcgattaacattccatctaaaacgggcaagattttc
catatggacaacgcgcaatttgagaatgcctattcggcggttgaagatagtttagcgaca
acaaccaatgaacgagcaatcaaacggctcaatcgattttattcatttgatatttgccca
acgtgtcatggaacgcgttttgcgcccaaattattaaacacaaaattagtggataaagat
atttctgaagtttcaaaaatgaccatcaccgaattaacccaatttatgcctaaaattgtg
ccgtggttaccagaaacgatgcacgaacttggcgctaatttggtaggtgaacttcaagat
agtgttcagcctgttttagacttaggactggattatttaaccttggatcgagagggcgac
accttatcaaccggggaattacagcgtattcaactcgggcgaactttacgcagccaaacg
accggggtgctttatgttcttgatgaaccatctgttgggctacatccagccaatgtcagt
ggcttaattaagattttgcatcagttagttgcgcaaggaaattcattagtagttgttgat
catgacacgcggattatttcggctgcggactatgtgattgagattggcccaggcgccggt
aaaaacgggggtacagttgttgaccaaggaacagtttctactattaagcagagcccgcaa
tcgctcattgcaccatttttaaatggaacagcgcaattattggttagaaagcaggttccg
aaagctaaactgtttgataagggcgatctaacgattggtgtgtctgatcgatataatctg
cataatgtcgtcgctcatttccccaagggacggctcagcgttgtggcaggattttcaggt
gctgggaagacaacgctgattttagatagtttaattccagcaattaaagcggcgattaaa
aaagaaccattaccagcccacattagtcagttagaccgcgcccatattcatcgggtggtc
atggtggattcggtaccagtcgggaaaaacgtccgttctacagtcgcaacttattctgga
attttggatacgctccgggctttattcgctgatactccggaggcaaaacaacggaagtgg
accgccagcaatttttcttacaatgtggcttcaggggcttgcccgaactgtaaggggacc
ggcacaatttcactggatattcagtacctgccagacatggtagaaacttgtcccgtttgt
cacggcaagcgatacaatgatgaaacattggcggtaaaatggcacggctataccattgcc
gatattttggcgcttaatgtagagcatgccttaccaatttttaaaggcgtgcctgcaatc
aaatcaattttggaaaaacttgatgaaatgggattgggatatcttgtattaggtgagagt
acgccaattctatccggtggtgaagcacagcgtttgaagttagtttcacaaatgggccgg
aaacaaagcgggacattatttgtgtttgatgaaccatctgtagggttacatccacttgat
attcaaacgttgattcatgtgtttgatcggttgattgatcaaggagctacaattattatc
attgaacatgatttggacgtgattgcgaatgcagattatgtggtcgatcttgggccaaaa
ggtggccaatttggtggaaaaatcattgccgccggtacgccaaaagaggtggcaaatacg
cctcaaagtgagacgggaaagtatttgaaaccgcactttgagttgtttcagtaa
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