Pirellula sp. SH-Sr6A: VN12_20250
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Entry
VN12_20250 CDS
T04360
Name
(GenBank) preprotein translocase subunit SecY
KO
K03076
preprotein translocase subunit SecY
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir02024
Quorum sensing
pir03060
Protein export
pir03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VN12_20250
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VN12_20250
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VN12_20250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pir02044
]
VN12_20250
Secretion system [BR:
pir02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VN12_20250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TMEM234
Dexa_ind
Motif
Other DBs
NCBI-ProteinID:
AMV34468
LinkDB
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Position
complement(5002170..5003534)
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AA seq
454 aa
AA seq
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MLEKLRVVFSIPELRQKILLTLALLAIYRIGYHIRLPVLQESSIAMGGQVQSFLDKVAVF
SATDLRTLTIFGLGIAPYISASIIFQLLGTVWGPIEQLRKEGPAGRKKINEYTRYLTVFI
CVIQSWVYLRYMIIGQSAGSISEFFYASGSNELSFGWQITSVAIMTAGSLFLMWLGEQID
EYGIGNGVSLLIMAGILAQMPKALWDLRQNMSSSLSGGSGSNIGPDVLLVLAFLFVAVVF
AVVFITMAQRRIQMQSAKHVRGRRVMGGSKQFLPLKINQSGVMPIIFAGSLLMIPALVFG
MLASASASWWPALTSVFNALSAMLNSGSSFAYNVLYVALIFFFCFFWTSIMFNPKEMSQN
LQDSGAFIPGYRPGKRTADYLEKVMVRITYVGAAFLAVVAIVPTIITSQFGVSFSVASFY
GGTGLLIAVSVAFDLIQKIDSHLLMRNYKGLLEE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaaaacttcgggttgttttttcgattcccgagcttcgtcagaagatattgctg
accctcgctttgttggcaatttaccgaatcggataccacatccgtcttcctgtgttgcag
gaatccagcattgccatgggcgggcaggtccagagttttcttgacaaggtcgctgtcttc
tctgcgacagacttgcgaaccttgaccatcttcggtctcggtatcgccccttacatttcg
gcgtcgattatcttccaattgttgggaacggtttggggtcccatagagcagcttcgcaaa
gaggggcccgcaggtcgaaagaagatcaacgaatacacccgttacctgaccgtattcatt
tgtgtgatccaaagttgggtgtatctgcggtacatgatcatcggtcagtcggccggctcc
atatccgagttcttttatgcgagcggatcgaacgaactttccttcggttggcagatcacg
tctgtcgccatcatgactgccggttccttgttcttgatgtggctcggtgagcagatcgat
gagtatgggatcgggaacggggtgtcgttgttgatcatggctgggattttggcccagatg
ccgaaagctttgtgggatttgcgacagaacatgtccagttcgttgagcggtggtagcggt
agcaacatcggacccgacgtgttgttggtattggcgttccttttcgttgcggtggtgttt
gccgtcgtgtttatcaccatggcacagcgacgcatccagatgcaaagtgcaaagcacgtt
cgcggccgacgtgtgatgggcggatcgaagcagttcttgccgcttaaaatcaatcagtcc
ggtgtgatgccgattattttcgcgggaagtcttttgatgatccccgcgttggtgttcggc
atgttggcgagcgcgagtgcatcttggtggcccgcgttgacctccgttttcaacgcgttg
tctgcgatgctcaattcaggttcgtcgtttgcttataacgtcctctatgttgctttgatc
ttcttcttctgcttcttttggacatcgatcatgttcaatcccaaggagatgtcgcagaac
ttgcaggattcaggcgcgttcattccgggttatcgtcctgggaagcggacagcggattac
cttgaaaaagtgatggttcggatcacctatgttggcgcagcgttcttggctgtcgtcgca
atcgttccgacgattatcacttctcagtttggtgtttcgtttagcgtggcctccttttac
gggggtacgggtttgttgatcgcggtgagtgtggcttttgatctgatccaaaagatcgac
agtcatttgctcatgcgaaactacaagggtttattggaagagtag
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