Pirellula sp. SH-Sr6A: VN12_22020
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Entry
VN12_22020 CDS
T04360
Symbol
lpxB
Name
(GenBank) Lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00540
Lipopolysaccharide biosynthesis
pir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VN12_22020 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pir01005
]
VN12_22020 (lpxB)
Enzymes [BR:
pir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
VN12_22020 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
pir01005
]
Lipid A
VN12_22020 (lpxB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LpxB
Motif
Other DBs
NCBI-ProteinID:
AMV34819
UniProt:
A0A142Y6I7
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All DBs
Position
5385346..5386677
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AA seq
443 aa
AA seq
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MNQNEFTECSHDGDCSQIYIDGSMLDSLGDETYMGQRFFFSVGEPSGDLHAANLIRSLKR
LSPTSTFRGFGGSRMIQAGLELDFDLTSMAVMGFAEVLPKLREFFRIAKLAEMSFARGEV
DGVVLVDFPGFNWHIAKRAKKYGIPVYYYLPPQLWAWGGWRIAKMRKHVDHVLCNLPFEA
AWFESKKMPATYVGHPFFDHIAQQPLDTKFIDRWRCNHQIQVSVLPGSRDHEVKHIWPLQ
LEAIRKLSRQFPHVQFMVAALKDSHALWCKNSLTASDAKLPIHIFAGKTSEIIELCDCSI
MKSGSVSLEMMARGKPATVMYHVNTTTYCMAKALVRIPSISLPNLIAEEPLLPECISHGS
LDSKSSKTSVQSVVEHMSRLLSDNAYRLNQRRKLIELSNQFARPGASYATAKFLLQELAS
TSHGTLPIDESDLPNSVVSRKAA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaacgagttcactgagtgcagtcatgatggtgactgtagtcaaatctatatc
gatggatcgatgctcgactcgttgggtgatgaaacgtacatgggacaacgttttttcttc
tccgtgggggaaccaagtggtgacctccatgctgcgaatctcatccgctcactgaagcgt
ctttcgcctacctccactttccgaggtttcggtgggtctcggatgatccaagcgggattg
gaactcgacttcgaccttaccagcatggcggtgatggggtttgccgaagtccttcccaag
ttgcgggagtttttccggattgcgaaactggcagagatgtcgtttgctcgcggagaggtc
gatggcgtggtcctggtagacttccccggcttcaactggcatatcgcgaagcgtgcgaag
aagtacggcatcccggtttactactaccttccgccccagttgtgggcatggggcggctgg
cgcatcgccaagatgcggaagcacgtcgaccatgtactgtgcaatcttccctttgaagct
gcttggttcgagagcaagaaaatgcccgcgacgtacgtggggcatcccttctttgatcac
attgcccagcaaccgctcgatacaaaattcatagatcgatggcgttgcaaccaccagatc
caggtatcggtcctgcccggctcgcgcgaccatgaagtcaagcacatttggccgctgcaa
ctcgaagcgatccgcaaactgtcgcggcaattcccgcatgtccaattcatggtagcggcg
ctcaaagattcccatgcgctttggtgcaagaattcgttgactgccagcgatgcgaaactt
ccgattcacatcttcgctggaaagacgagcgagatcatcgaattgtgcgattgttcgatt
atgaagagcggatccgtatccctcgagatgatggcgcgcgggaaacctgccacggtgatg
taccacgtgaacaccacgacgtattgcatggccaaagcgttggtccgaattccgagtatt
tcgcttcccaatcttatcgcggaagaaccccttctaccggaatgcatctcccatggttca
cttgactcaaagtcatcgaagacttcggtccaatcggttgtcgagcacatgtcgagacta
cttagcgacaatgcctatcgattgaaccaacgtcgaaagctgatcgaactctccaatcag
tttgcccgtccaggggcaagctatgcgacagccaagttcttattgcaggagttggcatcc
accagccacggtacattgccgatcgacgaatcggatctcccgaattctgttgtgtctcga
aaagcggcgtaa
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