Pyrobaculum islandicum: Pisl_0397
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Entry
Pisl_0397 CDS
T00444
Name
(GenBank) translation elongation factor 1A (EF-1A/EF-Tu)
KO
K03231
elongation factor 1-alpha
Organism
pis
Pyrobaculum islandicum
Brite
KEGG Orthology (KO) [BR:
pis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pis03019
]
Pisl_0397
03016 Transfer RNA biogenesis [BR:
pis03016
]
Pisl_0397
03012 Translation factors [BR:
pis03012
]
Pisl_0397
04131 Membrane trafficking [BR:
pis04131
]
Pisl_0397
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pis04147
]
Pisl_0397
Messenger RNA biogenesis [BR:
pis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Pisl_0397
Transfer RNA biogenesis [BR:
pis03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Pisl_0397
Translation factors [BR:
pis03012
]
Eukaryotic type
Elongation factors
Pisl_0397
Membrane trafficking [BR:
pis04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Pisl_0397
Exosome [BR:
pis04147
]
Exosomal proteins
Proteins found in most exosomes
Pisl_0397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
FeoB_N
Septin
DUF5128
DUF6104
Motif
Other DBs
NCBI-ProteinID:
ABL87575
UniProt:
A1RRJ3
LinkDB
All DBs
Position
complement(383289..384623)
Genome browser
AA seq
444 aa
AA seq
DB search
MPSIILPPKPTALQKPHLNLAVIGHVDNGKSTLVGRLLYETGYVDEKAFKEIEEMAKKMG
KEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFIKNMIVGASQAD
AALFVISARPGEFETAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDIVNYDQKRYEQIKA
EVSKLLKLLGYDPSKIHFIPVSAIKGDNVKTKSSNTPWYNGPTLLEALDTFQPPPRPVDK
PLRMPIQDVFTITGAGTVVVGRVETGVLKVGDRVVIVPPAKVGDVRSIETHHMKLEQAQP
GDNIGVNVRGISKEDVRRGDVLGKVDNVPTVAEEIVARVVILWHPTAIGPGYAPVMHIHT
ATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSEFPALGRFA
LRDMGRTIAAGQIIEVKPAQVQIK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgataatattaccaccaaaaccaacagctctacaaaagccgcacttaaaccta
gcagttattggccacgttgacaatggcaaatcgacattggtaggccgtctactatatgag
acaggttatgtagatgaaaaagcgtttaaggaaattgaagagatggctaaaaagatgggg
aaggaagacttcgcttttgcatggattcttgatagatttaaggaagagcgtgaacgcggc
gtaactatcgaggctacacacgtgggttttgagactaataaattattcattacaatcatc
gacttacctggccatagagacttcataaagaacatgattgttggagctagccaagcagat
gcagctctctttgtaatttctgcacgtcctggagagtttgaaacagccatagggcctcag
ggacagggcagagaacatctatttctcattaggacattgggtgttcaacaaatagtagtt
gctgttaataagatggatattgtaaactacgaccagaagaggtatgaacagattaaagcc
gaagtctctaagttattaaaactattgggctacgacccaagcaaaatacactttatccca
gtaagtgcgataaagggagataacgtcaaaactaagtcttccaacacgccgtggtataac
gggcccacgctacttgaagctcttgataccttccaaccgcctccaagacctgttgacaaa
ccgcttagaatgccgatacaagacgtatttacaattacaggcgcgggcactgtggtagtt
ggtagagttgagaccggcgtgttaaaggttggcgatagagttgtcatagtacctcctgct
aaggtaggcgacgtgagatctatagagactcaccacatgaaacttgagcaagcgcaacca
ggcgataatataggtgttaacgtgagaggtataagcaaagaggatgtaagacgtggagat
gtattaggtaaagtagacaacgtcccgactgtcgctgaagagatagtagcccgtgtagtt
atactatggcatcccacagctataggcccaggctacgcgccagttatgcatatacataca
gccacggtacctgtccaaattgtagagcttgtatctaaactcgacccacgcactggtcaa
gcagttgaacaaaagcctcaatttataaagcagggcgatgtggcaattgtaaagattaag
cctctgaagcctgtagttgcggagaagttcagtgaattcccagcgcttggccgctttgct
ctccgcgacatgggcagaactattgcggctggccagataattgaggtaaagcctgcgcaa
gtgcagattaagtaa
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