Pseudomonas izuensis: LAB08_R52870
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Entry
LAB08_R52870 CDS
T08555
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00260
Glycine, serine and threonine metabolism
piz00460
Cyanoamino acid metabolism
piz00630
Glyoxylate and dicarboxylate metabolism
piz00670
One carbon pool by folate
piz00680
Methane metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01200
Carbon metabolism
piz01230
Biosynthesis of amino acids
piz01240
Biosynthesis of cofactors
Module
piz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LAB08_R52870
09102 Energy metabolism
00680 Methane metabolism
LAB08_R52870
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LAB08_R52870
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LAB08_R52870
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LAB08_R52870
Enzymes [BR:
piz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LAB08_R52870
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BCX70609
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Position
5913310..5914563
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTENHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cccgcggtgatggaagctcaaggctcggtactgaccaacaagtacgccgaaggttacccg
ggcaagcgctactacggtggttgcgagtacgtcgacgtcgtcgagcagctggcaatcgat
cgcgccaaagagctgttcggcgccgattacgccaacgtccagccgcacgccggctcgcaa
gccaacagcgccgtttacctggccctgctgtcggccggcgacaccatcctgggcatgagc
ctggcccatggcggtcacctgacccacggtgccagcgtttcctcgtcgggcaagctgtac
aacgccatccagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgc
ctggctgtcgagcacaagccgaaaatgatcgtggccggcttctctgcctactcgcagatc
ctggacttcccgcgcttccgcgcaatcgccgacaaggttggcgcttacctgttcgtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgaacccggttccgttcgct
gacgtcgtgaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaagaagctgaactccgcagtattcccgggtgcccag
ggcggcccgctggagcacgtgatcgcggctaaagcgatttgcttcaaggaagcgctgcag
cctgagttcaaggcttaccagcaacaagtggtgaaaaacgcccaggccatggccagcgtg
ttcatcgagcgcggtttcgacgtggtctccggcggtactgaaaaccacctgttcctgctg
tcgctgatcaaacaggaaatctccggtaaggacgctgacgccgctctgggcaaggcattc
atcaccgtgaacaaaaactccgtgccaaacgacccacgctccccgttcgtcacttccggc
ctgcgcttcggcactccggctgtgaccactcgcggcttcaaggaagcagagtgcaaggaa
ctggccggctggatctgcgacatcctggctgacctgaacaacgaagcggtgatcgacgcc
gttcgtgagaaagtcaaagccatctgcaagaagctgccggtgtacggtgcttaa
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