Penaeus japonicus (kuruma prawn): 122248946
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Entry
122248946 CDS
T07703
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-A-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122248946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122248946
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122248946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_10
TPR_12
ANAPC3
TPR_8
TPR_16
TPR_17
TPR_1
SR-25
DUF7017
IMUP
Motif
Other DBs
NCBI-GeneID:
122248946
NCBI-ProteinID:
XP_042865302
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MAESKTPGEEPKENAAATENTNTSEATDIERELAQSAQAEFTKGNYSSALSLLSQLEGTR
PKDAKVLMNKAVVEYYKSDLKKTDAFRKQLFDICSKCGIKIDEVDSTDEVDRSVIHLNHC
MVLYHLHQFRTSIELLEKMYMGLESLEESVGIGVCLLLTECHLGAHQPARALAVISHTET
TFLPHPLPHTPSPKQRPPQEKENKSPEKGIMFSGTGSGSSSSSSSSSSSSSSTSTATDEI
KCSATQEQLRGKLQQLRVRALLMMRALRVAKKELKTIVTHAVSAGNTLNVTLVSLKSQLE
YLRGNYHKAIKVLNQCAAIPPPNITYGPSLGVMYYNNLGVIHLGLGKPTVACLYLQKALQ
ESQLTEATVSTPQSGDWLSSRPLYQLSSNVRIELYYNLGVTLLHMNKPEKAFDFLLEVLQ
VHSTNPRLWLRLAECCVAVHKAGIKDDAGLKKSIIQGTVGAGIHRKICFSTCVNDHNKKM
DPMSATDAAFPEPTLEFGRLCLRNALALLPENVSTTSLTDEQEASGVMPELYSAGPSSPM
RGTEVVSLRVSALACSAYVALCLSDHSAALRHAETLLAAHPKIPGVYKLLGHLYAGEALI
SLGRVPEAVTHLDPRLVGDMTLSPPSQEASQSFPPTQPNQGWSTGNTAAAMQVMRYNLSV
AYTLRGELEKANNLLKEVWTERNGNTPAQVIMLAMYIQLQMGNADVMRNIVKKNILLT
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagtaaaacacccggagaggaacccaaagagaatgcagcagccacagaaaac
acaaacacttcagaagcaacagacattgaacgggaattggcacagtcagcacaggccgaa
tttaccaagggaaactacagctctgcactatcacttctcagtcagctagaaggaacgaga
ccaaaggatgcaaaagttttaatgaacaaggcagtggtagaatattacaagagtgacctc
aagaaaaccgacgcattccgtaagcagttgtttgacatctgctcaaagtgtggaatcaag
attgatgaggtagattctacagatgaagtagataggagcgttattcacctgaaccactgt
atggtgctttaccatctccatcagtttcgtacttccattgaactcctagagaagatgtat
atggggctggagtctctagaggagagtgttggcattggagtctgcttactgttaaccgaa
tgccatttaggagcacatcaaccagcaagagccttagccgttatatcacacacggagacc
acatttttgcctcatcctttaccccacacaccttcaccaaaacagcgtcccccacaggaa
aaagaaaataagtctccagaaaaaggaattatgtttagtggtacaggcagtggtagcagc
agtagcagcagtagcagcagcagtagtagcagtagtacaagcacagccacagatgagatc
aagtgtagtgctacacaagaacagttacgtgggaaactacagcaactgagagtacgagcc
ctgttgatgatgcgagccttaagagtagcaaagaaagaactcaaaactatagtaacacat
gcagtcagtgccggcaataccctgaatgtaactttagtcagccttaagagccagttggaa
tacctgagaggtaattaccacaaagcaataaaagttctcaaccagtgtgctgcaatacca
cctccaaatatcacatatggaccaagcttaggtgtcatgtattacaataatcttggggtg
attcaccttggtcttggaaaaccgactgtggcctgtctttacctacaaaaagcccttcaa
gaatcacaactgacagaagcaacagtctcaactccccaatctggtgattggttatctagt
cgtcctctgtaccagctgagtagtaatgttcggattgagttgtactataatcttggtgta
acactcctgcacatgaataaaccagagaaagcatttgatttcctattagaagtattgcaa
gtgcattctaccaatccaagattatggctgagactggcagagtgctgtgtagcagtacac
aaggctggtatcaaagatgatgctggtttaaagaagtccatcattcaggggacagttggt
gctggtatccataggaaaatatgtttttcaacatgtgttaatgaccacaacaagaaaatg
gatccaatgtccgcaactgatgcagcatttccggagccaactcttgaatttggccgattg
tgtcttcgtaacgccctagctcttttacccgaaaatgtttccacaacctcactaactgat
gaacaagaggcctcaggtgtgatgcctgagctgtactctgctggaccatcctctcccatg
cgtggaactgaagtagttagtcttcgtgtttctgctctagcctgtagtgcctatgtggct
ctgtgtctctctgatcactccgcagctctcagacatgcagagacattattagcagctcat
ccaaagattcctggagtttataagttattaggtcatctgtatgcaggagaagcccttatt
tctcttggtcgtgtgcctgaggctgtaacccatttagatccaagactggtgggtgatatg
actctatctcctccctcacaagaagctagccaaagttttccacctactcagcctaatcaa
ggatggtctactgggaacacagcagcagccatgcaagtaatgaggtataacctaagtgtt
gcttataccctacgtggagaactagagaaggctaacaatttgctcaaggaggtctggact
gaaagaaatggaaacactccagcacaagtcattatgttagcaatgtacatacagctgcaa
atgggcaatgcagatgttatgaggaacatagtaaagaagaatatacttctaacgtga
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integrated database retrieval system
