Paenibacillus kribbensis: B4V02_07100
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Entry
B4V02_07100 CDS
T05249
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb00040
Pentose and glucuronate interconversions
pkb01100
Metabolic pathways
pkb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B4V02_07100
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B4V02_07100
Enzymes [BR:
pkb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
B4V02_07100
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ASR46460
UniProt:
A0A222WJ31
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Position
complement(1592932..1594215)
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AA seq
427 aa
AA seq
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MKKRFSLGIAAALLFTTLAPLGTPAHAATDIGKETLGSKNGWAAFSTGTTGGAAASSSNI
FTVTNRKQLVDALGKSSNTTPKIIYVKGTINVNVDDNNKPLGLNDYKDPNYDFDAYIKAY
DPSTWGKKAPSGTLEKAREASQKNQASRVVIQIPSNTTIVGLGSNAVINGVNFQLKKGTD
NVIIRNIEFQDAYDYFPQWDPTDGSTGNWNSEYDSITINGATHVWVDHNTFNDGSHPDSQ
NGTYYGREYQHHDGLLDVVNQADLVTASYNHFSNHDKTSIIGNSDSKTADEGALRVTLHH
NYYENTVQRTPRVRYGQVHLYNNYYTGDVKRSEYPLLYIWGAGKSSKIFAENNVIDVAGL
SAAKIVTVFGGTALSDTGTILNGQAVNAGSSAGLSSSVGWKPSLNDKISPSASVKAEVTS
QAGSGKL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagattttcactcggaatcgcagcagccttgctgttcacaaccctggctcct
cttggtacacctgctcatgcagccactgatattggtaaagaaacgctcggcagcaaaaac
ggttgggcagccttttctacaggcacaacaggcggggccgcagcctcctcttctaatatt
ttcactgtaacgaatcgcaaacaactggtggatgctttgggtaaaagcagcaatactacc
cctaaaatcatttatgtcaaaggtacgatcaatgtcaatgtcgatgacaataacaagccg
ttgggattgaacgattacaaggaccctaattatgattttgacgcatatatcaaagcatat
gacccgtccacatgggggaaaaaggctccttccggtacattggaaaaggcacgtgaagct
tctcaaaaaaatcaggccagtcgtgttgtcattcaaattccatccaatacaacaattgtc
ggcctgggcagcaatgccgttattaacggcgtgaacttccaactgaaaaaagggacagac
aatgtcattatccgcaatattgaattccaggatgcctacgattatttcccacaatgggac
ccaaccgacggcagtacaggcaactggaattcggaatatgacagcattaccattaacggt
gccactcatgtatgggtagaccacaataccttcaacgatgggtctcacccggacagccaa
aacggtacctactatgggcgggaataccagcatcatgatggacttctcgatgtggtcaat
caagccgatctggtcactgcttcttacaatcatttttccaatcatgataaaacctcaatt
attggcaacagcgacagtaaaacagcagatgaaggggctttacgtgtaaccctgcatcac
aattattatgaaaacacagtacaacgcacaccacgtgtacggtatggacaagtccatctg
tacaacaattactatacaggtgatgtaaaacgctccgaatatcctttactgtatatatgg
ggcgcaggcaaatcctccaaaatcttcgccgaaaacaatgtcattgacgttgccggttta
tctgcagctaaaatcgtgactgtctttggtggaactgccctgtcagatacgggcacaatc
ctgaatggacaagctgttaacgcaggctccagcgcaggtcttagctcctctgtaggctgg
aaaccatcgctgaacgataagatttccccatctgccagcgtaaaagcagaagtcacttcg
caggccggttccggcaaactgtaa
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