Pseudomonas knackmussii: PKB_1031
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Entry
PKB_1031 CDS
T03081
Symbol
secD
Name
(GenBank) Protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc03060
Protein export
pkc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PKB_1031 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PKB_1031 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pkc02044
]
PKB_1031 (secD)
Secretion system [BR:
pkc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PKB_1031 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecD_1st
SecD_SecF
Sec_GG
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
CDF82396
UniProt:
A0A024HBY5
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Position
1080738..1082600
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AA seq
620 aa
AA seq
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MLNKYPLWKYLLILAVLAVGFIYSAPNLYPDDPAVQISGASTALQVTQADVDKASKALTD
AGIAVKAGSLGKSSGLIRLVKKDDQLPAKDIVRRAMGDDYVVALNLAQTTPQWLRNIAAH
PMKLGLDLSGGVHFLLEVDMDKAVDSRMGIYESEIKSALRKEHLRYRSLPIQDRAIQLGF
TDTDSLDKAKALIAKDYRDFEVTQDTRNDMQVLRLVMTPAKLAEIREYSIKQNLTTVRNR
VNELGVSEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAGADAIKSATESF
EFRQPGRPPVALERGVIITGDQVTDASASFDENGRPQVNIRLDGHGGDLMNRATRNNVGR
SMAVVFIEQKPITRYTKQVVNGVEQEVAVQAFKEEKKIISLATIQSALGNQFRITGLDAP
GESSELALLLRAGGLAAPMYFAEERTIGPSLGADNIAKGIDASLWGMVFVSLFIIVIYRF
FGLIATVALAFNMVMLVALMSILGATLTLPGIAGIVLTMGMAVDANVLIFSRIREELAGG
MSVQRAIHEGFSRAFTAILDANLTSLLVGGILYAMGTGPVKGFAVTMSLGILTSMFTAIL
VTRAMVNLIFGGRDFKKLWI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgctcaataaatatcccctgtggaaatacctgctgatcctggcggtgcttgccgtcggt
ttcatctattccgcacccaacctctatccggacgacccggccgtgcagatcagcggcgcg
agcactgcgctgcaggtcacccaggctgacgtcgacaaggccagcaaggcgctgaccgat
gccggcattgccgtcaaggcggggagcctcggcaagagcagcggcctgattcgcctggtc
aagaaagacgaccagctgccggccaaggacatcgtgcgtcgcgccatgggcgacgactac
gtggtcgcgctgaacctggcgcaaaccactccgcaatggctgcgcaacatcgccgcgcac
ccgatgaagctgggtctggacctttccggtggcgtgcacttccttctcgaagtggacatg
gacaaggcagtcgattcccgcatgggcatctacgagagcgagatcaagagtgcgctgcgc
aaggagcacctgcgctaccgcagcctgcctatccaggatcgcgccatccagctgggcttc
accgataccgactcgctggacaaggccaaggcgctgatcgccaaggattaccgtgatttc
gaagtgacccaggacacccgcaatgacatgcaggtgctgcgcctggtcatgaccccggcc
aagctggccgagatccgcgaatactcgatcaagcagaacctcaccaccgtgcgcaaccgc
gtcaacgagctgggtgtgtccgagccgctggtgcagcgccagggcgccaaccgcatcgtg
gtcgagctaccgggcgtacaggacactgccgaagccaagcgtatcctcggcaagactgcc
aacctggagttccgcctggccgctggggctgatgcgatcaagtccgctaccgaatccttc
gagttccgtcagcctggccgtccgccggtggctctggagcgcggcgtgatcatcaccggt
gaccaggtcaccgatgccagcgccagcttcgacgagaacggtcgcccgcaagtgaacatc
cgcctcgacggacacggcggcgacctgatgaaccgcgcaactcgcaacaacgtcggccgc
agcatggcggtggtgttcatcgagcagaaaccgatcacccgctacaccaagcaggtggtg
aacggcgttgagcaggaagtcgcggtacaggcgttcaaggaagagaagaagatcatcagc
ctggcgaccatccagtcggccctcggcaaccagttccgcatcaccggcctcgacgcgccg
ggcgagtcgtccgaactggccctgctgctgcgcgccggtggcctggccgcgccgatgtac
ttcgccgaagagcgcaccatcggcccgagcctgggtgccgacaacatcgccaagggtatc
gacgcttccctctggggcatggtgttcgtctccctgttcatcatcgtcatctaccgcttc
ttcggtctgatcgcgaccgtcgccctggccttcaacatggtcatgctggttgcgctgatg
tcgattctcggcgcgaccctgaccctgccgggtatcgccggtatcgtgttgaccatgggt
atggcggtggacgccaacgtgctgatcttctcgcggatacgtgaggaactagccggcggc
atgtcggtacagcgcgccatccatgaaggtttcagtcgcgccttcacggcgatcctcgac
gccaacctgacctcgctgctggtcggcggcatcctctacgccatgggcaccggcccggtg
aagggcttcgccgtgaccatgtcgctcggcattctcacctcgatgttcacggccatcctg
gtcactcgcgcgatggtcaacctgatcttcggcgggcgtgacttcaagaagctgtggatc
taa
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