Pseudomonas knackmussii: PKB_5372
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Entry
PKB_5372 CDS
T03081
Symbol
gcdh
Name
(GenBank) Glutaryl-CoA dehydrogenase, mitochondrial
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00071
Fatty acid degradation
pkc00310
Lysine degradation
pkc00362
Benzoate degradation
pkc00380
Tryptophan metabolism
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01120
Microbial metabolism in diverse environments
Module
pkc_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
PKB_5372 (gcdh)
09105 Amino acid metabolism
00310 Lysine degradation
PKB_5372 (gcdh)
00380 Tryptophan metabolism
PKB_5372 (gcdh)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PKB_5372 (gcdh)
Enzymes [BR:
pkc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
PKB_5372 (gcdh)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Motif
Other DBs
NCBI-ProteinID:
CDF86684
UniProt:
A0A024HPX3
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Position
5664983..5666164
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AA seq
393 aa
AA seq
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MATKASFNWEDPLLLDQQLTEEERMVRDSAYQFAQDKLAPRVLEAFRHEQTDPAIFREMG
ETGLLGATIPEQYGGSGLNYVCYGLIAREVERIDSGYRSMMSVQSSLVMVPINEFGNEAT
KQKYLPKLASGEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLTGAKMWITNSPIADVF
VVWAKDDEGQIRGFVLEKGWEGLSAPAIHGKVGLRASITGEIVMNNVFVPEENAFPEVRG
LRGPFTCLNSARYGISWGALGAAEACWHTARQYTLDRKQFGRPLAANQLIQKKLADMQTE
ITLALQGCLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARMARDMLGGNGISDEFGVAR
HLVNLEVVNTYEGTHDVHALILGRAQTGIQAFF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaagcaagcttcaactgggaagacccgctgctgctggatcagcaactcacc
gaagaagagcgcatggtgcgcgacagcgcctaccagttcgcccaggacaagctggccccg
cgcgtgctggaagccttccgccacgagcagaccgacccggcgatcttccgcgagatgggc
gaaaccggcctgctcggcgcgaccatccccgaacaatacggtggcagcggcctgaactac
gtgtgctacggcctgatcgcccgtgaagtcgagcgcatcgactccggctaccgctcgatg
atgagcgtgcagtcctccctggtgatggtgccgatcaacgaattcggcaacgaagccacc
aagcagaaatacctgccgaaactggccagcggcgaatacatcggctgcttcggcctgacc
gagccggaccacggctccgacccgggctcgatgatcacccgcgccaagaaggtcgacggc
ggctaccgcctgaccggcgccaagatgtggatcaccaacagcccgatcgccgacgtcttc
gtggtctgggccaaggatgacgaaggccagatccgcggcttcgtcctcgagaaaggctgg
gaaggcctgtccgccccggcgatccacggcaaggtcggcctgcgcgcgtccatcaccggc
gagatcgtgatgaacaacgtgttcgtcccggaagagaacgccttccccgaagtgcgcggc
ctgcgcggccccttcacctgcctgaactcggcacgctacggcatctcctggggcgccctg
ggtgccgccgaagcctgctggcacaccgcccgccagtacaccctggaccgcaagcagttc
ggccgcccgctggctgccaaccagctgatccagaagaaactggccgacatgcagaccgag
atcaccctcgccctgcaaggctgcctgcgcctgggccgcatgaaggacgaaggcaccgcc
gcggtggaaatcacttccatcatgaagcgcaacagctgcggcaaggccctggacatcgcc
cgcatggcccgcgacatgctgggcggcaacggcatctccgacgagttcggcgtggcccgt
cacctggtcaacctggaagtggtgaacacctacgaagggacccacgacgtccacgcgctg
atcctcggccgcgcacagaccggcatccaggccttcttctga
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