Paracoccus kondratievae: F8A10_05785
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Entry
F8A10_05785 CDS
T06245
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pkd
Paracoccus kondratievae
Pathway
pkd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pkd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F8A10_05785 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkd03400
]
F8A10_05785 (uvrB)
DNA repair and recombination proteins [BR:
pkd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F8A10_05785 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F8A10_05785 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_16
AAA_22
Kinesin
eIF3_p135
AAA
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QFQ86979
LinkDB
All DBs
Position
1:complement(1145968..1148154)
Genome browser
AA seq
728 aa
AA seq
DB search
MGHNNTNAPVARFPEVTRPKLEGGKRFVMHSEFQPAGDQPTAIAELVRGVQDGERDQVLL
GATGTGKTFTMAKVIEATQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSYYDYYQP
EAYVPRSDTYIEKESQINEAIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDLVVGQSYDQRQFLAELVAQQYRRLDAAFQRGGFRVRGDVIEVWPAHLEDRAWRFDFFG
NELESITEFDPLTGARTDSFKQIRIYANSHYVTPRPTLQQAVKGIRAELQTRLKQLTDEG
KLLEAQRLEQRTNFDLEMLEATGTCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFAD
ESHVSVPQIGGMYRGDFRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAQ
WEMDQTGGVFVEQVIRPTGLLDPEVEIRPVEMQVDDLLDEVRKVTASGYRTLVTTLTKRM
AEDLTEYMHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLV
AILDADKEGFLRSETSLVQTIGRAARNAEGRVIMYADRVTGSMERALAETERRRKKQIAY
NETHGITPQTVKKNVEDVLAGLWQGDTDQSRITAKVDKPMVGSNLAAHLDALRAQMRKAA
ENLEFEEAARLRDEVKRLEAVELAISDDPLARQSAVEEAAEAAVKSSGRSTAGRAGQRGG
NKRSRRHR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacaacaacaccaacgcccccgtcgcacgctttcccgaagtgacccggcccaag
ctggaaggtggcaagcggtttgtcatgcattccgagttccagcccgccggggaccagcct
accgccatcgccgagctggtgcgcggcgtccaggatggtgagcgcgatcaggttctgctg
ggggcaaccggtaccggcaagacctttaccatggccaaggtgatcgaggcgacgcagcgc
ccggcaatcattctggcaccgaacaagacgctggcggcgcagctttacggcgagttcaaa
ggattttttcctgaaaatgccgtcgaatattttgtcagttactacgactattaccagccc
gaggcctatgtgccgcgctcggacacctatatcgagaaagaatcgcagatcaacgaggcc
atcgaccggatgcgccattcggccacccgtgcgctgttagagcgggatgatgtgatcatc
gttgcctcggtttcctgcatctatggtatcggctcggtcgagacttattcggcgatgacg
caagatcttgtcgtcgggcaatcctatgatcagcgtcagttcctggccgagctggttgca
cagcaataccgtcgccttgacgcagctttccagcgcggcggtttccgggtgcggggcgat
gtgatcgaggtctggcctgcacacctcgaagatcgggcgtggcgctttgactttttcgga
aatgagcttgaatccattacggaatttgatccgctgaccggtgccaggactgacagcttc
aaacagatccgtatctatgcaaacagccactatgtgacgccgcgcccgactttgcagcaa
gctgtcaaagggatacgggcagaacttcaaacgcggctgaaacagttgactgatgaaggc
aaactgcttgaggcccagcggcttgaacaacgcacaaactttgacctggaaatgcttgag
gcgacggggacttgtaacgggattgagaactattcgcgctatctgaccggtcgcgccccg
ggtgagccgccgccgacgctgtttgagttcatccccgacaacgcaatcgtctttgccgat
gaatcccatgtcagcgtgccccagatcggcggcatgtaccgcggtgacttccgccgcaag
ttcacgctggccgagcatggtttccgcctgccctcgtgcatggacaaccggcccctgaag
ttcgaggaatgggacgcgatgcgcccgcaatcggtctttgtcagcgccacccccgcacaa
tgggagatggaccagaccggcggtgtctttgtcgaacaggtcatccgccccaccggcctg
ctggaccccgaggtcgagatccggccggtcgaaatgcaggtcgacgatttgctggacgag
gtgcgcaaggtcaccgccagcggctatcgcacgctggtcaccacgctgaccaagcgcatg
gcagaggatctgaccgaatatatgcatgaacagggcatccgcgtgcgctacatgcacagc
gatatcgacacgatcgaacgtatcgaaattctacgcgacctgcgccttggtgcctttgac
gtactgatcggcatcaaccttttgcgcgaggggctggacattcccgaatgcgggctggtt
gccattctcgatgccgataaagagggctttctgcgttcggaaacctcgctggtccagacg
attggccgtgcggcgcgcaacgccgaggggcgcgtcatcatgtatgccgaccgtgtcacg
ggcagcatggagcgcgcccttgccgagaccgagcgtcgtcgcaagaaacagatcgcttat
aacgagacccatggcatcacgccccagacggtcaaaaagaacgtcgaggatgttctggcc
gggttgtggcagggcgacaccgatcagtcgcgcatcacggccaaggtggataaacctatg
gtcggctctaacctggccgcccatcttgatgcgttgcgggcacagatgcgcaaggctgcc
gaaaacctggaattcgaagaggccgcgcggctgcgtgatgaggtgaaacggctcgaagca
gtagagcttgcgatttcggacgatcctctggcgcggcaatccgctgtcgaagaggcggcc
gaggcggcggtcaaatcctcgggacggtcaaccgctgggcgcgccgggcaacgcggtggc
aacaagcgctctcgtcgccaccgttga
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