KEGG   Paraburkholderia kirstenboschensis: RW095_01280
Entry
RW095_01280       CDS       T09457                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pkf  Paraburkholderia kirstenboschensis
Pathway
pkf02024  Quorum sensing
pkf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pkf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RW095_01280 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RW095_01280 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkf03019]
    RW095_01280 (hfq)
   03036 Chromosome and associated proteins [BR:pkf03036]
    RW095_01280 (hfq)
Messenger RNA biogenesis [BR:pkf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     RW095_01280 (hfq)
Chromosome and associated proteins [BR:pkf03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    RW095_01280 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: WOD14182
UniProt: A0ABZ0EDA6
LinkDB
Position
3:complement(251815..252078)
AA seq 87 aa
MAALPDVQEIFLRVLIDDKAAVNVFLVNGIRLSGQLAAFDRFAVVLESASGSQLVFKHAI
STVLPVNGRDLARGSGAAVSRDKPNNL
NT seq 264 nt   +upstreamnt  +downstreamnt
atggctgcattgccggacgtacaagaaatttttttgcgggtgctcatagacgacaaggcc
gccgtaaacgtgttccttgtgaacggcatcaggctgagcggtcaactggccgcctttgac
cgatttgcggttgtgttggagtctgcctcaggttcacaacttgttttcaaacatgccatc
tcgaccgtgctgcctgtcaatggaagggacttggcacgcggttccggcgcggcggtgagt
cgggacaagccgaacaacttgtga

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