Paramormyrops kingsleyae: 111846609
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Entry
111846609 CDS
T05788
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111846609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111846609
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111846609
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111846609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
111846609
NCBI-ProteinID:
XP_023672744
Ensembl:
ENSPKIG00000002914
LinkDB
All DBs
Position
Unknown
AA seq
2397 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNQHGPEADRHLLRCLFSRVDFTAD
SKNSSKDSHQAQFLAQECASLVSKPNFISTLCYAIDNPLHYQKSLKPTSHLFSQLSKVLK
LSRVQEVIFGLALLNSSNSELKGFAAQFVKQKLPDLLRSYVDTDLTGNQEGGFQDIAVEV
LHLLLSHLLFGQKGACGVGQEQIDAFLRTLCRDFPQVQCPVVLAPLLYPEKRDVLIDRIL
PDSGGIAKMTMESSLAEFMLELGYGFCASVDECRNIIMQFGAREVTASQVARVLGMMART
HSGLSDGIALQSISAPTSGIWSEGKDKNDTSQTHTWNFEVFIDVVKEINPSLNFKEVTYE
LDHPGFVIRDSKGLQVVVFAIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQQSLMSPEVFS
FADYPCHTVAIDILKAPPEDDNRDIATWKSLDLVESLLRLSELGQYEPVKQLFSFPIKHC
PDVLVLALLQITTSWHALRHELISALMPIFLGNHPNSAIVLHYAWHGQGQSLSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLVPEKDQPRSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVVPKGRAPSTSSLDAVSPVQMDALSTMSSL
SLGTSSTSLTQSMQAFPTPLVPAFSTPQSPVKAFPSISSPSPATPFVGIASLAQLPGSLG
TGSLTGIGTGLALPAVSTEPFVTRKMSTSGLNPAAFQQTDLSQVWPEANQNFSKEIDDEA
NSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSSVKREREVFNCMLRNLFEEYRFFPQYPDK
ELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDY
PQYCQHLASIGHFMQFPHHLQEYIEYGQQTRDPPVKMQSSITGPTSLPLVQPPPKASMLP
SQSSSMVPSTSAIPTTASATKTTTIARPTSVSFKKDVPPSINTTNIDTLLVATDQIERIV
EPPENIQEKIAFIFNNLSQSNMIQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLY
SNFLDTLKNSEFFKMVLIETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKNKP
ILYTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSLIFRPQNPWTMAIMNVLAEL
HQEHDLKLNLKFEIEVLCKNLSLDINDLKPGTLLKDQHKLSTLEVQLSAPKKESRPAEEA
QPVSTKGQPSNFVAAPPAPPGSGTPSTATGPPTALFSYHDINVYSLAGLAPHVTVSHTIP
LLQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDPEESRMRMAA
HHMMRNLTAGMAMITCREPLLVSIAANLKSGFTAALRAPTPQQREMMEEAVAKIAQDNCE
LACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPGVLTYQAERMPEQIRLKV
GGVDPKQLAVYQEFARNVPGFLPSNDLSQPTGFLAQPMKQQVWPTDDMAQIYDKCLADLE
QHLHAISPALAVNPLTQALRSLTESVALTRNNRDSVAALALLQKAVEGLLDATSSADPDL
LLRYRECHLLVLKALQDGRAYGPQWCNKQVTRYLMECRDEYKYNVEAVELLIRNNLVNMQ
QYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDECSVSQVTEADLFHTIEALMRTSAHSRA
NAPEGLPQLMDVVRSNYEAMMDRSHGGPNFMMHSGISQASKYDDPPGLREKAEYLLREWV
SLYHSSAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRTHTEQQHT
PAAGATIIRAKCYHNLDAFVRLIALLVKHSGEAANTVTKINLLNKVLGIVVGVLIQDHDV
RHTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPAKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYIAPFLRNVELSKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINV
APRILTNFTGVMPTQFKKDLDSYLKTRSPVTFLSELRSNLQVGGTSLGPWRHLQLSDTSL
DQVSNEPGNRYNFQLINALVLYVGTQAIGHIHSKGSSPSMSTITHSAHMDIYQNLAVDLD
TEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHP
WGLLITFIELIKNPAFKFWSHNFVHCAPEIEKLFQSVAQCCMGQKQAQQVIEGTGAG
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactctctttcgctggctttgtctcaaatcagctacttggtggacaattta
actaagaaaaactatagagctagccagcaggaaatacagcacatcgtgaatcagcacggc
cctgaggcagacaggcatcttctccgctgtctcttctcccgtgtggattttactgccgat
agtaaaaacagcagtaaagattcccatcaggcacagtttctggcccaggagtgtgcatct
ctggtatccaagccaaactttatctccaccctttgctacgccattgataatccactgcat
taccagaagagtttgaagccaacatcccacttgttttcgcagctaagtaaagttctgaaa
ctaagtcgggtccaggaggtgatttttggtcttgctttgctgaactcttccaattcagag
cttaaggggtttgctgcccagtttgtgaagcagaagctaccggaccttctgcgctcctac
gtggacacagacctcactgggaaccaggaaggtggcttccaggatattgctgtagaggtt
cttcacctgctcctctcccatctcctctttggacagaagggagcttgtggggtaggacag
gaacagattgacgcatttctcaggactttgtgcagagatttcccccaggtgcagtgccct
gtggtgctggcaccactgctgtacccagaaaaacgggacgttctgatcgataggatctta
ccggattctggggggatcgcgaagatgacgatggagagctcgcttgccgagttcatgctc
gaacttggctatggattctgcgccagtgtggatgaatgtcgcaacataatcatgcagttt
ggggcgcgggaggtcacagccagccaggtggcacgagtgttggggatgatggcccgaact
cactctggcctttcggatggtattgccctacagtcaatctctgcaccgaccagtgggatc
tggagtgaggggaaggacaagaacgatacctcccagacccacacgtggaacttcgaagtt
ttcattgacgtcgtcaaagaaatcaaccccagtcttaacttcaaagaggtcacctatgag
ctagaccacccggggttcgtcatccgtgacagcaagggcctgcaggtagtggtgtttgcc
atacagaggggcctcggtatggaagtctttccagtggacctcatctacaggccatggaag
cacgctgaaggccagttatcgtttatccagcaatctctgatgagcccagaggttttctct
tttgctgattacccctgtcacactgtggctattgacatcttgaaggcccccccagaggac
gataaccgggacatagctacctggaagagtctggacttggtggagagtctgctgcggctg
tcggagctgggtcagtacgagccagtgaagcagctcttcagcttccccatcaagcactgc
cctgatgtgctggtgctggcgctgctgcagatcaccacgtcttggcacgccctgcggcac
gagctcatctctgctctcatgcccatcttcctgggcaaccatcccaactcggccatcgtc
ttgcattacgcatggcacggacagggccagtccctctccatccgtcagctgataatgcat
tcgatggcagagtggtacatgaggggagagcaatatgaccaggccaagctgtcccgcatc
ttagatgtggctcaggacttgaagtctctctccatgctgctgaatggcactccgtttgcc
ttcgtcattgatctggctgcactagcgtctcgccgtgaatacctcaaactcgacaaatgg
ctgaccgacaaaatcagagagcatggggaaccctttatccaggcctgcgtgacgtttctg
aaacggcgctgtccctccatcatgggtggcttggtgcccgagaaggaccagcccaggagt
gcccagctacccccggagacgctggccaccatgctggcatgcctgcagtcctgtgcgggg
agcgtatctcaggagctgtccgagaccatcctcaccatggtggcaaactgcagcaatgtg
atgaacaaagctcgccagccccctccgggggtcgtgcccaagggtcgcgctcccagcacc
agcagcctagatgctgtatcccccgtgcagatggatgcccttagcaccatgagctcctta
agccttggaacctcatctacatcactcacccagagcatgcaggctttccccacacccctg
gtccctgccttcagcaccccacagtccccggtcaaggccttcccctcaatatccagtccc
agccccgccactccatttgtgggcatcgcaagcctcgctcagcttccaggttcgctgggc
acaggcagcttgactggcattggcacagggctggcactgcctgcagtgagcaccgagccc
tttgtcaccaggaagatgagcacatctggactgaacccagctgccttccagcagactgac
ctttctcaggtgtggcctgaggccaatcagaactttagcaaggagatcgatgatgaggca
aacagctacttccagcgcatctacaaccacccgccgcatcccaccatgtccgttgacgaa
gttcttgagatgctccagcggttcaaggactcaagcgtcaaacgcgagcgagaggtgttc
aactgcatgctcaggaacctgtttgaggagtaccgcttcttcccccagtaccccgataag
gagctgcacatcactgcctgtctgtttggcggcattatcgagaagggccttgtgacctac
atggccctggggctagctctgcgctacgtcctcgaggccttgaggaagccttttggctct
aaaatgtactattttggtatcgctgcgctggatcgctttaagaacaggctaaaggactat
cctcagtattgccagcatttagcctccattggccactttatgcagttccctcatcatctt
caggagtacatcgagtacggccagcagacgagagaccctcctgtgaagatgcagagctcc
attaccggtccgactagcttgcctctggtccagcctcccccaaaagcatccatgctgcca
agccaatccagctccatggtaccgagcacctctgccatccccaccactgcctctgccacc
aaaaccaccaccattgcccgtccgacttcagtgagcttcaagaaggatgtacctccttcc
ataaacactaccaatattgacaccctgcttgtggccactgatcagattgagaggatagtg
gaacctccagaaaatatccaggagaaaattgcattcatcttcaataatttgtctcagtcc
aacatgattcagaaggttgaagagctgaaggaaactgtgaaggaggagttcatgccttgg
gtgtcccagtacctggtcatgaagcgagtcagcattgagcccaacttccacagcctctac
tcaaactttttggacacactgaaaaactctgaatttttcaaaatggtcctgattgaaact
tacagaaacatcaaggttcttctcacctctgataaggcagcggccaacttctctgaccgg
tccctgttgaagaatttgggccattggcttgggatgattactctagctaaaaacaagccc
atcctctataccgacctggatgtgaaatcccttttgctggaagcctatgtgaagggacag
caggagctcctgtatgtcgtcccctttgttgccaaagtcttggaatccagcctcaggagc
ctcatcttcagaccccagaatccctggaccatggccatcatgaatgtattggcagaactg
caccaggaacatgacttgaagttgaacttgaagtttgaaatcgaagtgctatgcaagaac
ctttccctggacattaacgacttgaagcccggcactctgctcaaggaccagcacaagctc
agcaccctggaggtgcagctgtctgcaccaaagaaggaatccaggccagcagaggaagcg
cagccagtcagcaccaaaggtcagcccagcaatttcgttgcagcccccccggcgccgccg
ggcagcgggacacccagcacggccacgggccccccgaccgccctcttcagttaccatgac
attaacgtgtactccttggcaggactggccccccatgtcactgtcagccacacgattccc
cttctacaggcccacccccagctgaagcagtgcgtgcggcaggccattgaacgtgccgtt
caggagctcgtgcaccctgtagtggaccgctctatcaagatcgccatgacaacctgtgag
cagatcgtcaggaaggacttcgctctggaccctgaggagtcacgcatgcggatggcagcg
catcacatgatgcgcaacctgacggctggcatggccatgatcacgtgcagggagccgctg
ctcgtcagcatcgccgcaaacctgaagagtggcttcaccgcggcgctcagggcccccact
ccccagcagagagagatgatggaggaggccgtggccaagatcgcgcaggataactgcgag
ctggcgtgttgtttcatccagaagacggccgtggagaaggctggcccagagatggacaag
aggctagctaccgagtttgagctgaggaagcacgccaggcaggagggccgtcggtactgt
gacccgggcgtcctgacctaccaggccgagcgcatgccagagcagatccggctgaaggtc
ggaggagtggaccccaaacagctcgccgtctaccaggaatttgcacgcaatgtcccagga
ttcctgccaagcaatgacctttcccagcccactggcttccttgctcagcccatgaagcag
caggtctggccaacagacgacatggctcagatctatgacaagtgcctggccgatctagag
cagcacctgcacgccatatccccggcgctggccgtgaacccgctgacgcaggcgctgcgg
agtctcacggagtccgtggctctcacccgcaacaatcgcgacagcgtagcggcactggcc
ctgctgcagaaggcagtggaggggctgctggatgccaccagcagtgcggacccagacctc
ctgcttcgctacagagagtgccacctgctggtgctgaaggccctgcaggatgggcgtgcc
tacggcccacagtggtgcaacaagcaagtcaccaggtacctcatggagtgcagagatgag
tacaagtataatgtggaggcggtggagctcctgatcagaaacaacctggtcaacatgcag
cagtatgacctgcaccttgcccagtcaatggagaacggtctgcactacatggctgtggcc
ttcgccatgcaactggtgaagctgctgctggtggatgagtgcagtgtgagccaggtcacc
gaggcagacctcttccacaccatcgaggcgcttatgcgcaccagcgcccactccagagcc
aatgcacctgagggtctcccccagctgatggatgtggtccgctcgaactacgaagccatg
atggaccgctcccacggcgggcccaacttcatgatgcactctgggatttcccaggcctca
aagtatgacgacccccctggcctcagggagaaggcagaatacctcctgagggagtgggtc
agcctgtaccactcgtctgctgcaggacgtgacagcaccaaggctttctctgccttcgtc
ggacagatgcaccagcaggggatcctgaagaccgacgacctgatcacacgtttcttccgg
ctctgcacggagatgtgcgtggagatcagctaccgcactcacaccgagcagcagcacacg
ccggccgctggtgccaccatcatccgtgccaagtgctaccacaacttggacgcctttgtg
cggcttatcgccctgctcgtgaagcactctggcgaggcagccaacaccgtcacaaagatc
aatctgctcaacaaggtcctgggcatcgtggtcggcgtcctcatccaggatcatgacgtt
cgccacactgagttccagcagttaccgtatcaccgtatcttcatcatgctgcttttggag
ctgaatgccccagagcacgtgttggaaacgatcaacttccagaccctcactgccttctgc
aacacatttcacatcctgcggccggccaaggccccaggcttcgtctatgcttggctggag
ctcatctctcatcgcatcttcatcgcccggatgctggctcacacgccacagcagaagggt
tggccaatgtacgcccagcttctgattgacctgttcaagtacatcgcccccttcctgagg
aatgtggaactcagcaaacctatgcaaattctctacaagggtactctgcgggtcctcttg
gtcctgcttcatgacttcccagaattcctgtgtgactaccactacggcttctgtgatgtc
attcctccaaactgcatccagctgcgtaacctgatcctcagtgccttcccccggaatatg
aggctccctgaccccttcacccccaacttgaaggtggacatgctcagtgaaatcaatgta
gctcctcgtatcctcactaactttactggagtgatgcctactcagtttaaaaaagacctg
gactcctacctgaaaactcgctcccctgtcacatttctgtccgagctacgcagcaatctg
caggtagggggcaccagtctgggtccctggagacatttgcagctcagcgacacatcttta
gaccaggtgtcaaatgagccagggaatcggtacaatttccagctgattaatgccctcgtg
ctgtacgtggggactcaggccattggccacatccacagcaagggcagcagcccctccatg
agcacaatcacccactcagcccacatggacatctaccagaatctggccgtggacttggac
actgagggacggtacctgttcctcaatgccattgccaatcagctgcgctaccctaacagc
cacacacactacttcagctgtaccatgctgtacctctttgctgaagccaacactgaggcc
atccaggagcagataacaagggtcctgctggagaggttgatcgtgaaccggccacacccc
tggggtctgctcatcaccttcatcgagctcatcaagaatcctgccttcaaattctggagc
cataactttgtgcactgtgcaccagagattgagaagttgttccagtccgtggctcagtgc
tgcatgggccagaagcaggcacagcaggtgattgagggcactggtgccggttag
DBGET
integrated database retrieval system
