Paramormyrops kingsleyae: 111851887
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Entry
111851887 CDS
T05788
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111851887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111851887
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111851887
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111851887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
111851887
NCBI-ProteinID:
XP_023682969
Ensembl:
ENSPKIG00000023538
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLCYAIDNPLHYQKSLKPSPHLFTQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFASQFVKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGACGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASIEECRNIILQYGAREVTASQVARVLGMMART
HSGLSDGIPLQSISAPGSGIWSDGKDKSDGSQAHTWNVEVLIDVVKELNPNLNFKEVTYE
LDHLGFIIRDSKGLQVVVYGILRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLLSPEVFC
FADFPCHTVAVDILKAPPEDDNREIATWKSLDLVECLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGSLAPEKEQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSSVMNKARQPPPGVLPKGRAPSTSSLDAISPVQMDPLSAMGTL
SLGTSAASHTQSMQGFPTPLSSAFSNPQSPAKAFPALSNPNPTTPFGGIGSLTSQLPASH
ELAPCVYSGPLGTGSLTGIGSGIGMPAVNSDPFGTRKMSTPGLNPPTFQQSKMNASDLSQ
VWPEANQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCM
LRNLFEEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMY
YFGIAALDRFKNRLKDYPQYCQHLASIAHFAQFPHHLQECVQYIEYGQQSRDPPVKMQGS
ITTPGSLALAQAQAQSQVPPKAPMPGQVNTIVTTSTTTTVAKTTTITRPTAVNFKKDVPP
SINTTNIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMP
WVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFAKMVLNETYRNIKVLLTSDKAAANFSD
RSLLKNLGHWLGMITLAKNKPILYTDLELKSLLLEAYVKGQQELLYVVPFVAKVLESSLR
SMIFRPQNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKEK
LKNLEEQLSAPKKEAKPPEEILPIVTTGDFIPFTAAPPTSTATACTATGPPTPQFSYHDI
NVYSLAGLAPHININITIPLLQAHPQLKQCVRQSIERAVQELVHPVVDRSIKIAMTTCEQ
IVRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLVSIANNLKNSFAAALRAPTP
QQREMMEEAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCD
PVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQ
AWATDDVAQIYDKCIADLEQHLHAIPPALAMNPQTQALRSLLESVVLARNSRDGIAALGL
LQKAVEGLLDATSAADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEY
KYNVEAVELLIRNHLVNMPQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHITE
ADLFHTIETLMRTSAHSRANAPEGLPQLMEVVRSNYEAMMDRAHGGPNFMMHSGISQASE
YDDPPGLREKAEYLLREWVSLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRL
CTEMCVEISYRAQAEQQHNPAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLN
KVLGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFH
ILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVEL
NKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPD
PFTPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSN
EPGNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRY
LFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLI
TFIELIKNPAFKFWNHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctttcgctggctttgtctcaaatcagctatctagtggacaattta
actaagaaaaactatagagccagccagcaggaaatacagcatatcgtgaatcgacacggc
cccgaggcagacaggcatttgttacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagcggtaaagattttcatcagacacagtttctgatccaggagtgtgcgtcg
ctgattaccaagccaaatttcatctcaaccctttgttacgccattgacaatccgttacat
tatcagaagagtttgaagccatctccccatttgtttactcagctgagtaaagtccttaaa
ttaagcaaagttcaagaggtgatttttggccttgccttgttgaactcgtccagctcagac
ctaagaggatttgcatcccagtttgtgaaacagaaacttcccgatcttctgcgctcatac
gtggacgcagacctcgggggtaaccaagaaggtggattccaagatattgctatagaagtc
cttcacctgctcctctcccatctcctttttggacagaagggagcctgtggggttggacag
gaacagattgacgctttcctcaaaactctgtgccgagatttcccgcaggaacgctgtcct
gtggtgcttgcaccacttctgtaccctgaaaaacgggacattctgatggacaggattctg
cccgactctggagggatagcaaagaccatgatggaaagttcccttgcagacttcatgcaa
gaagttggctatggattctgtgcaagtattgaggaatgccgcaacataatcctgcagtat
ggggcgcgggaggtcactgccagccaggtggcccgtgtcttgggtatgatggcccgtacc
cactctggcttgtcagacgggattcccttgcagtccatttcggcaccagggagtggaata
tggagcgatgggaaggacaagagcgatggatcgcaggcgcacacctggaatgtggaagtc
ttgatcgacgttgtcaaggaactaaaccccaatctgaatttcaaagaagtgacctatgag
ctagaccacctggggtttatcatccgtgacagcaaggggctccaagtagtggtgtatggc
atcctgagaggtcttggtatggaggtctttcctgtggatctcatctacaggccctggaag
catgctgaagggcagctatcttttatccagcattctctcctgagcccagaggtcttctgt
tttgctgacttcccatgtcacactgttgctgttgacatcctgaaggccccccctgaagat
gataatcgggagatagcgacatggaagagcctcgacctggtcgagtgcctgttacggctg
tcggaagttgggcagtacgagcaggtgaagcagctcttcagctttcccatcaagcactgc
cctgacatgctagtattggcgctgctgcagatctccacctcctggcacaccctgcgccat
gagctcatctccaccctgatgccaatctttctgggcaaccaccccaattcagccatcatt
ttgcactacgcatggcacggacagggacagtccccctccatccgtcaactgatcatgcac
tcgatggctgaatggtacatgagaggggaacagtatgaccaggctaagctctcccgcatc
cttgatgtggctcaggatctaaagtctctctcgatgctgctgaatggtactccatttgcc
tttgtaattgaccttgctgcacttgcatctcgccgtgaatacctcaaacttgacaaatgg
ctgactgacaaaatcagagaacatggggaacccttcatccaggcctgtgtaacattcctg
aaaagacgctgtccgtctattatgggcagcttggctccagagaaggaacagcccaagagt
gcacagctcccccctgaaacactcgctaccatgctggcatgtctgcagtcctgtgcaggg
agtgtgtctcaggagttatctgagaccatcttaaccatggtggccaattgtagcagtgtg
atgaacaaggctagacagccgccacctggggttttgccaaagggacgcgctccaagcacc
agtagcctggacgctatttccccagtgcagatggaccctctgtctgccatgggtacactg
agccttggcacttcagctgcttcccacacgcaaagcatgcagggcttccccacccccctg
agctctgcctttagcaaccctcagtcgccagcaaaggcctttcctgccctgtcgaaccca
aaccccactaccccattcggaggcatcggaagtctcacttcccagcttccagcatctcat
gaattggctccctgtgtttactcagggcctttggggactggcagccttactggtattggg
tctggaattggtatgcctgctgtgaacagtgacccatttgggaccaggaagatgagcaca
ccaggactaaaccctcccacgttccagcagagtaagatgaatgcctctgacctttctcag
gtgtggcctgaggcaaaccagcactttagtaaggaaattgatgatgaggctaacagctac
ttccagagaatttacaaccatcctccacatccaacgatgtctgttgacgaggtactagaa
atgctgcagaggttcaaggattcgaacatcaaacgcgagcgtgaagtcttcaactgtatg
ctgaggaacttgtttgaggagtaccgcttcttccctcaatatccggacaaggaactgcac
atcactgcctgtctgtttggtggcatcatcgagaagggtctggtgacttacatggcactc
gggctggccttgcgctatgtccttgaagccttaaggaaaccctttggatcaaaaatgtac
tactttgggattgctgcattagataggtttaagaacaggctgaaggactatccccagtat
tgtcagcacttggcttccattgctcactttgctcagtttcctcatcatttacaggagtgt
gtgcagtatattgagtatggacagcagtcacgagaccctcctgtgaagatgcaagggtct
atcacaaccccaggcagcctcgcactcgcccaagcccaggctcagtcgcaggttccccct
aaagctcccatgccaggacaggtcaacaccatagtaaccacatccaccacaaccactgtt
gctaaaaccactaccatcacccggcccactgctgttaacttcaagaaggatgtgccgcct
tctataaacacaaccaatattgatacactgctggtggcaacagatcaaactgagagaatt
gttgaacctccagagaatgtccaagaaaagattgctttcatatttaacaacttgtcacaa
tccaacatgacacagaaggttgaggaattgaaggagactgtgaaggaggagtttatgcct
tgggtttctcagtaccttgtcatgaagagggtcagcatcgagccaaacttccacagcctc
tactcaaacttcttggatactttgaagaatccagaatttgccaaaatggttcttaacgaa
acctacagaaacatcaaggttctgttgacatccgataaggcagcagctaatttctctgac
cgttctctgctgaaaaatttggggcattggcttggaatgatcactttggccaaaaacaaa
cctatcttgtatacagacctggagctaaagtctctcctgcttgaagcctatgtgaaagga
cagcaggagttactctatgtggtcccttttgttgccaaagtgttggaatcaagtttgagg
agcatgatttttcgaccccagaacccatggactatggccatcatgaatgtactggcagaa
cttcaccaggaacatgatctgaagctaaacttgaagtttgagattgaggtgttgtgcaag
aacttatcactggacatcaatgatctaaagcctggaaacctgctgaaggacaaagaaaag
ctgaagaacttggaggagcagctgtcagcaccaaagaaagaagccaaaccacctgaagaa
attctgcctatcgtcacgacaggagactttattccgtttacagctgcgcctcccacctct
acagccacagcctgcacagccactggcccccccactccacagttcagttaccatgacatt
aatgtgtactcgctggctggcctagcacctcacatcaacatcaacatcactatcccactt
ctgcaagcccatccccagctgaagcagtgcgttaggcagtccattgagcgtgcggtccag
gagctcgtccaccctgtggtggaccggtccatcaagatcgccatgacgacctgcgagcag
atagttaggaaggactttgccctggactctgaggagtcacgcatgagagtggcggcgcat
cacatgatgcgtaatctgaccgcgggaatggccatgatcacctgtagggagccgctgctc
gtcagcatcgccaacaaccttaagaacagcttcgctgctgccctcagggctcctactcca
cagcagagggaaatgatggaggaggctgcagcccgtattgcgcaggacaactgcgagctg
gcctgctgcttcatccagaagaccgctgtggagaaggccggcccggagatggacaagcgg
ctggccactgagtttgagctgaggaagcatgcccgacaggagggccgccgttactgcgac
cctgtggtactgacataccaagctgagcgcatgcctgaacagatccgcctcaaggtcggc
ggtgtggaccctaaacagctagcagtttatgaagagtttgcccgtaatgttcccggtttc
ttacccagcaatgacctctctcagcccactggcttccttgcgcagcctatgaagcaacaa
gcctgggctactgatgacgtggctcaaatctatgacaagtgcatcgctgacctggagcag
cacctgcacgccattcccccggccctggccatgaatccacagacacaggccctacgcagc
ctgctggagtctgtggtcctggccagaaactccagggatggcattgctgccctcggattg
ctccagaaggctgtggagggcctcctggatgcgaccagcgctgctgatgctgacctcctg
ctgcgctacagggagtgtcacctcctggtcctgaaggccctgcaggacggccgcgcctac
ggcccccagtggtgcaacaagcagatcacccgatgcctgatagagtgccgagatgagtac
aagtacaacgtggaggccgtggagctcctgatcagaaaccacctggtcaacatgccacag
tacgacctgcacctcgcccagtcgatggaaaacgggctgcattacatggcagtggcgttt
gccatgcagctggtgaaactgctgctggtggatgagcgtagtgtgagccacatcacggag
gctgacctcttccacaccatcgagacgctgatgaggaccagtgctcactccagggccaac
gcccctgaggggctcccccagcttatggaagtggtacgctccaactatgaagccatgatg
gatcgtgcacacggagggcccaacttcatgatgcactctggaatctcccaggcatcagaa
tatgatgacccacccgggctgagggagaaggcggagtacctgctgagggagtgggtcagc
ctgtaccactctgctgctgcagggcgtgacagcaccaaggccttctccgcctttgtggga
cagatgcaccagcaggggatcctgaagaccgacgaccttatcacgcgcttcttccggctc
tgcacggagatgtgcgtggagatcagctaccgtgctcaggctgagcagcagcacaaccca
gctgccatcatacgcgccaagtgctaccacaacctggacgcgttcgtgcgcctcatcgcc
ttgctggtgaagcactctggggaagctaccaacacggtcaccaagataaatctgctcaac
aaggttctgggtatagtcgtgggtgtcctgattcaagaccacgacgtccgtcagacggag
ttccagcagctgccttaccaccgcatcttcatcatgcttctgctggagctgaatgcacct
gagcatgtgctggaaactatcaacttccagaccctgactgccttctgtaacacgttccac
attttgaggcccaccaaagctccggggtttgtgtatgcctggctggagctgatctctcac
cgcatattcattgccaggatgctggctcacaccccgcaacagaagggttggcccatgtat
gcccagctgctgattgacttattcaagtatctggctccgttcttgaggaatgttgagctt
aacaaacctatgcaaattctctacaagggcactctacgtgtgctcctggtccttcttcat
gacttcccagaattcctgtgtgattatcactatggtttctgtgacgttataccaccaaac
tgcatccagctacgtaacctgatcctcagtgcctttccacgcaacatgaggcttcctgat
cccttcactccaaacctgaaggtggacatgctaagtgaaatcaatattgcaccacggatc
ctcactaattttactggagtgatgccatctcagtttaagaaggatctggactcttacctg
aagacgcgttccccagtcacatttttgtcggagctccgcagcaacctgcaggtgtcaaat
gagccaggaaatcgctacaatatccagctaattaatgcactagtgctttatgtgggaact
caagctattgcccatatccacaacaaaggcagcactccttccatgagcaccatcacccac
tcggcacacatggacatcttccagaacctggctgtggacctggacactgagggccggtat
cttttcctcaacgctattgccaatcagctgcgttatcctaacagccacactcactacttc
agttgcaccatgctgtatctgtttgctgaagccaacacagaggccatccaggagcagatt
acaagggtcctgctggagaggctgattgtgaaccggccacatccgtggggcctgctaatc
accttcatagagctcatcaagaacccagccttcaagttttggaaccatgactttgtgcac
tgtgcaccagagatagagaaactcttccagtcagttgcacagtgctgcatgggacaaaaa
caagcacagcaagtgatggagggcactggtgccagttag
DBGET
integrated database retrieval system
