Pipistrellus kuhlii (Kuhl's pipistrelle): 118720403
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Entry
118720403 CDS
T07682
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118720403 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkl03019
]
118720403 (CNOT1)
Messenger RNA biogenesis [BR:
pkl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118720403 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118720403 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
118720403
NCBI-ProteinID:
XP_036296135
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAGQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPALNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMDVFPVDLIYRPWKNAEGQLSFIQHSLINPEIFC
FADYPCHTVVIDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVMALLQINSNWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPTKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLTETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcttca
ctgattacaaagccaaattttatctctacgttgtcctatgccattgataacccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctaagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccaatttatcaaacagaagctcccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatcgcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggcgcctttggagttggacag
gagcagatagacgcttttcttaagacgctgcgcagagattttccccaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtatcgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtaacagctggccaggtagcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggaattccattgcagagtatctctgctcctggcagtgggatc
tggagtgatggaaaagataaaagtgatggcgcacaggcacatacatggaatgtagaagtc
ttgattgatgttctcaaagagctgaacccggctttgaatttcaaggaagtaacttatgaa
ctggatcatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcaaaggggattgggtatggacgtgttcccagtagacctcatatatagaccttggaaa
aacgcagaaggccagctctcctttattcagcattcccttataaatccagagatcttctgt
tttgctgactatccttgtcatactgttgtcattgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacgtggaagagcttggatttgattgaatctctactgaggctt
gcagaggtgggacaatatgagcaagtcaaacagctcttcagtttccctatcaaacactgt
ccagacatgctggtaatggccttactgcaaatcaacagcaactggcacaccttgcgccat
gaactcatctctactctgatgccaattttccttggaaaccatcctaactcagctattatt
ttgcactatgcatggcatgggcagggacagtctccctctatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggagagcagtatgaccaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaaatgg
ctcacagataaaattcgagagcatggagaaccttttatccaggcatgcatgactttttta
aagaggcggtgtccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccggaaactctggcgacaatgttggcctgtttacaagcttgtgcaggg
agtgtgtctcaggaattatcagaaaccattctcaccatggtagccaattgcagcaatgtc
atgaataaggccagacagccaccacctggagttatgccgaaaggacgccctcccagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacactcagagtatgcagggttttcctccaaatttg
ggttctgccttcagtacccctcagtcaccagcaaaagcattcccacccctttctactcca
aatcaaacaactgcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggcgcttggactccctgcagtgaat
aacgatccttttgtgcagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagaggtttaaagactctacc
ataaagagggaacgagaagtatttaattgtatgctaaggaacttgtttgaagaatatcgt
tttttcccccagtaccctgataaagagttacatataacagcctgcctgtttggtgggata
attgaaaaagggctggttacttacatggcactaggcctggccctgcgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattattttgggattgctgcactagataga
tttaaaaatagattgaaggactatcctcagtattgtcagcacttggcttctatcagtcac
tttatgcaatttcctcatcatttacaggagtatatcgagtacggacagcagtctagagac
cctcctgtgaaaatgcagggctctatcacaacccccgggagcattgcactggcgcaggcc
caggcccaggcccaggttcccacaaaagcgcctcttgccgggcaggttagcaccatggta
acgacctcgacaaccaccactgtggcaaaaacggttaccgtcaccaggcctactggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacgttgcttgtg
gccacagatcaaactgaaagaattgtagagccccctgaaaatatccaagagaaaattgct
tttatcttcaacaatctctcacagtcgaatatgacacaaaaggttgaagaactaaaggaa
acagtgaaggaagaattcatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaactttcatagcctgtattcaaacttccttgacacactgaagaatcctgaa
tttaataagatggttctaactgagacctacagaaacatcaaagtgctcttgacctctgat
aaagctgcagccaatttttcagatcgttctttgctgaagaacttgggacactggctagga
atgatcacactagctaaaaataaacccatcctacatactgacttggatgtaaaatctttg
ctgctagaggcttatgttaaaggacagcaagaattgctctatgtggtgccctttgttgcc
aaagttttagagtctagcattcgtagcgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacatcaggaacacgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaacgagctaaaacctgga
agcctcctgaaggacaaagatcgcctcaagaacttagatgagcagctctctgccccaaag
aaagatgtcaagcagccagaagaactgcctcccatcacaaccacaacaacttctacaaca
ccagctactagtaccacctgtacagccactgttccaccacagccacaatacagctatcat
gacatcaacgtctattccctggcaggcctggctccgcatattactttaaacccaacaatt
cccttgtttcaggcccatccacagttgaagcagtgtgtgcgtcaagcaattgaacgggct
gttcaggagttggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gaacaaatagtcagaaaggattttgccctggattctgaggaatctcggatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacctgcagggaacct
ctgctcatgagcatatccaccaacctgaaaaacagttttgcctcagcccttcgtactgcg
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagacggcagtggaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaaggacgaaggtac
tgtgatcctgttgtgttaacataccaagctgagcggatgccagaacaaataagattgaaa
gttggtggtgtggacccaaagcagttggctgtttatgaagaatttgcacgcaatgtgcct
ggtttcttgcctacgaatgatttaagtcagcccacaggatttttagctcaacccatgaag
caagcttgggcaacggatgatgtagctcaaatttatgacaagtgcattacagaactagaa
cagcacctacatgccatcccaccaactttggccatgaaccctcaagctcaagctcttaga
agtcttctggaggtggttgtgttatctcggaactctcgggacgccatagctgctcttgga
ttgctccagaaggctgtagagggcttactagatgccacaagtggtgctgatgctgacctg
ctcctgcgctacagggaatgccacctcttggtcttgaaggctcttcaagatggccgggcg
tatgggtctccgtggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggcagtggagttgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaactacatggctgttgca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgcccatattact
gaggctgatctgttccacaccattgaaaccctcatgagaattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaagggatcctgaagactgatgac
ctcataacaaggttcttccgtctgtgtactgaaatgtgtgttgaaatcagttaccgtgcc
caggcagagcagcagcacaaccctgctgccaatcccaccatgatccgagccaagtgctat
cacaacctggatgcctttgtccgactcattgccctgttagtgaagcactcaggggaggcc
accaacactgttacaaagattaacctgctgaacaaggtccttggtatagtagtgggagtt
ctcctacaggatcatgatgtccggcaaagtgaatttcagcagctcccctaccatcgcatt
ttcatcatgctgctcttggaactcaatgcacctgagcatgtattggaaaccattaatttc
cagacacttacagctttctgcaatacattccacatcttgagacctaccaaagctcctggc
tttgtgtatgcgtggcttgaattgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaagggatggcctatgtatgcacagctactgattgatttattcaaa
tatttagcacctttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaag
ggcactttaagagtgctgttggttcttctgcatgatttcccggagttcctttgtgactac
cattatggattctgtgatgtgatcccgcccaattgtattcagctaagaaacctgatcctg
agtgccttcccgagaaacatgaggctcccagacccattcactcctaatctgaaggtggat
atgttgagtgaaattaacatcgcaccccggattctcaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcggtcaccagtcacttttcta
tcagatctgcgcagcaacctacaggtatccaatgagcctggcaatcgctataacctgcag
ctcatcaatgctctggtgctctatgtcgggactcaggccattgcgcacatccataacaag
ggcagcacaccttcaatgagcaccatcacccactcggctcacatggacatattccagaac
ctggctgtagacttggacactgaaggtcggtatctcttcttaaacgcaattgcaaaccag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctgtatcttttcgca
gaggccaacactgaagctatccaagaacagatcacaagggttctcttggaacggttgatt
gtaaatagaccacatccttggggtctacttattaccttcattgagctgattaaaaatcca
gcgtttaagttctggaaccatgaatttgtacactgtgccccagaaattgaaaagttattc
cagtccgtcgcacagtgctgcatgggacagaagcaggctcagcaagtaatggaagggacg
ggtgccagttag
DBGET
integrated database retrieval system
