Pipistrellus kuhlii (Kuhl's pipistrelle): 118727209
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Entry
118727209 CDS
T07682
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118727209 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkl03041
]
118727209 (PRPF38B)
Spliceosome [BR:
pkl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118727209 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
118727209 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
118727209
NCBI-ProteinID:
XP_036308659
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQPPCGGGGGGATKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRG
VGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWF
ESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPR
KIKKDGKEGVEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGCSSFDRELERE
KERQRLEREAKEREKERRRSRSIDRGLDRRHSRSRERHRTRSRSRDRKGDRRDRDREREK
ENERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKKD
SKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKSESKEKSNKRSRSGSQGR
TDSAEKRKRERSPSKDKSRKRSGSKERAHKRDHSEGKDQCDKQDERRSQSAEPESQEKQK
SKDETV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgcg
gccgcggcccagcagcagccgccgtgcggcggcggcggcggcggggccaccaagccggcg
gtgtcgggcaagcagggcaacgtgctgccgctgtggggcaacgagaagaccatgaacctc
aaccccatgatcttaaccaacatcctgtcgtcgccttacttcaaagtgcagctctacgag
ctcaagacctaccacgaggtggtggacgagatctacttcaaggtcacacatgttgaacca
tgggagaaaggaagcaggaagacagcgggccaaacagggatgtgcggaggggttcgaggt
gttggaacaggaggaattgtttctacagctttttgcctgttatacaaattatttactctg
aagttaactcgaaagcaagtgatgggtctcatcacacacacagactctccatatattaga
gccctcggatttatgtacataaggtacacacagccccctacagatctgtgggattggttt
gaatctttccttgatgacgaagaggacctagatgtgaaggctggcggaggctgtgtaatg
accattggagaaatgctgcggtcttttctcacaaaactggagtggttttctaccttgttt
ccaagaatcccagttccagttcagaagaatattgatcaacagattaaaacccggcctcgg
aaaatcaagaaagatgggaaagaaggcgttgaagaaatagacagacatgttgaacgcagg
cgttcaaggtctccaaggagatcactgagcccgcggaggtccccgagaagatcgagaagt
cgaagccatcatcgggagggccatgggtgttctagtttcgaccgagaattggagagagag
aaagaacgccagcgcctggagcgcgaagccaaagaaagagagaaagaaaggcggcgatcc
cggagtattgatcggggcttagatcgaaggcatagcaggagtagggaaaggcatagaact
cggagtcggagtcgtgataggaaaggagatagaagggacagggatcgggaaagagaaaaa
gaaaatgagaggggtagaaggcgagatcgtgactatgacaaggaaagaggtaatgaccga
gaaaaggagcgagagcgatcaagggagcggtccaaggagcggagaagtaggggtgaggtg
gaagaaaaaaaacataaagaagacaaagatgataggcggcacagggatgacaaaaaagat
tccaaaaaagagaaaaaacacagtagaagcagaagcagagaaaggaagcataggagtagg
agtagaagtaggaatgcagggaaacggagcagaagcaggagcaaagagaaatccagtaag
cacaagagcgaaagcaaggagaagtccaataagcgaagtcggagtggcagccaaggaaga
actgacagtgcggaaaagagaaaacgggagcggagccccagcaaagataaatctagaaag
cggagcggcagcaaagaacgtgcccacaaacgggatcacagtgaaggcaaggaccagtgt
gacaaacaggatgagcgaaggagccaaagcgcagaacctgagagccaagaaaaacaaaaa
agcaaagatgagactgtgtga
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