Plasmodium knowlesi: PKNH_0301700
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Entry
PKNH_0301700 CDS
T01094
Name
(RefSeq) pre-mRNA-splicing factor CLF1, putative
KO
K12869
crooked neck
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_0301700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
PKNH_0301700
03036 Chromosome and associated proteins [BR:
pkn03036
]
PKNH_0301700
Spliceosome [BR:
pkn03041
]
Complex B
Other components
Prp19-related factors
PKNH_0301700
Complex C
PKNH_0301700
Chromosome and associated proteins [BR:
pkn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
PKNH_0301700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
Suf
TPR_19
ARM_TT21_2nd
HAT
TPR_12
BSD
Motif
Other DBs
NCBI-GeneID:
7318796
NCBI-ProteinID:
XP_038969416
UniProt:
A0A679L168
LinkDB
All DBs
Position
3:complement(79446..82352)
Genome browser
AA seq
708 aa
AA seq
DB search
MNVNSKKLQVKNKNAAEVQITAEQLINEALDLEEVEQKVNYNLIDEDELNEYKISKRKEY
EDKIRKRRYLISTYIKYALWEVKQKDIRRARSIFERALNIDYTNINLWLKYIEVELLNKN
INSARNLFERAVLLLPMENIFWKKYAHLEEILNNFVNARNIYERWIKWKIDETSFLCYIN
FEERCREIDNCRNIFERLIVTLPKMECFYRFIKFERKYRNVDRARACFEKCIELLPPSFL
DEHFYINFCNFEEENNEYERCRKIYIEALKILPKNKSEFLYKSFLQFQKKYADKEELDET
LMIKERITYEEEIKKNPSDYDTWFNYIKLEESNINLVNKDRCVVRIRELYERAISIIPPV
ANKKFWKRYIYLWINYAIFEELHAENVQRARDVYRNVLKILKNQNFTFKKIYLLYANFEI
RQMDIPKVRSIFNRAIESVKKEEIFEEYCEMELRLGNIKECRDIYAKYVEAFPFNSKAWI
SMINFELSLDEVERARQIAEIAIHLDDMKLPELIWKNYIDLEINLQEYENAKKLYERLLN
ITQHYKVYKSYAEFQYIYFDDIAKCREILENGIEFCKKNELVNERCILLNFLYEIEKDYG
DKDVIDKTQKRLPKKIKKRKIIKKDDDEVVEEFITYVFPDDGNQSQNMKIFQKALEWKKK
MEEERAREAKKQKKKENAEEEEEEKESNKEKGDDDDEEEDDERENDTE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaatagcaagaagttgcaggtgaagaacaagaacgcggcggaggtgcagata
accgcagagcagctgataaacgaggcactggacctggaggaagtggagcagaaggtgaac
tacaacctgatcgacgaggatgaactgaacgaatataaaataagtaagagaaaggagtat
gaagataagataaggaagagaaggtacctgattagtacctacataaagtacgccctgtgg
gaagtaaagcaaaaagacattcgaagggcaagatccatttttgaaagggcattaaatata
gactacaccaatataaatttgtggttaaaatatatagaagtagaattactaaataaaaat
ataaacagcgcgagaaatttatttgaaagagcagttctgctgctacctatggaaaatatt
ttctggaagaaatatgcacacctggaagaaattttaaacaattttgtgaacgctagaaat
atatacgaacgatggataaagtggaaaatagacgaaacctcatttctgtgttatatcaat
tttgaggaaagatgtagagagattgataactgcagaaatattttcgagagacttattgta
acgctacctaagatggaatgtttttacagatttattaaatttgaaaggaagtataggaac
gtggatagagctcgggcatgtttcgaaaagtgtattgaattattacctccatcttttctg
gatgaacatttttatataaatttttgcaattttgaagaagagaataatgaatatgaaagg
tgcagaaaaatatatattgaggcacttaaaattttaccaaaaaataaaagtgaatttttg
tacaaaagctttttacaatttcagaagaagtatgctgataaggaggaactggacgagaca
ttgatgattaaggagagaattacttacgaggaggaaattaaaaaaaacccttctgattat
gatacatggtttaattacatcaagttggaagagtcaaacataaatttggtgaataaggat
agatgtgttgtccgcataagggaactatacgaaagagccattagtattatcccacctgtg
gcaaataaaaagttttggaaaagatacatttacttgtggattaattatgccatctttgag
gaactgcatgcagaaaatgtgcagagagctcgagatgtatacagaaatgttctgaaaatc
ttgaagaaccagaattttacctttaagaaaatttacctactatatgctaattttgaaatc
cggcagatggacattccaaaggtgagatcgatttttaaccgcgccatcgaaagtgttaag
aaggaggagatatttgaggagtactgcgagatggaacttcgcctagggaacattaaggaa
tgccgcgatatctacgcgaagtatgtcgaggccttcccctttaactcgaaggcctggatc
tccatgatcaacttcgagctgtccctggacgaggtggaacgcgctcggcaaatcgcagaa
attgccatccacctggacgacatgaaactccccgaactgatctggaaaaactacatagac
ttagaaataaacctgcaggagtatgaaaatgccaagaagttgtatgagaggcttttaaat
ataacccagcattataaggtatacaaaagctacgcggagttccagtacatctacttcgac
gacatcgccaagtgcagagaaattctggaaaatggaatcgagttttgcaagaaaaatgaa
cttgtcaatgaaaggtgcattttgctgaactttctgtacgaaattgagaaagactacggg
gataaagacgttatagataaaacgcagaaacggttgcccaagaaaatcaagaagaggaaa
atcattaagaaggatgatgatgaagtagtggaggagttcatcacatacgttttccccgac
gacgggaaccaatcacagaacatgaagatatttcagaaggccctcgagtggaagaagaaa
atggaggaagagcgggcaagggaagcgaagaagcagaagaagaaagaaaacgcggaggaa
gaggaagaagaaaaggagagtaacaaggagaaaggcgatgatgatgacgaggaggaagac
gacgagagggagaatgacactgaataa
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