Pseudomonas koreensis: AYO71_18265
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Entry
AYO71_18265 CDS
T04647
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr00260
Glycine, serine and threonine metabolism
pkr00270
Cysteine and methionine metabolism
pkr00450
Selenocompound metabolism
pkr01100
Metabolic pathways
pkr01110
Biosynthesis of secondary metabolites
pkr01230
Biosynthesis of amino acids
Module
pkr_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AYO71_18265
00270 Cysteine and methionine metabolism
AYO71_18265
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AYO71_18265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pkr04147
]
AYO71_18265
Enzymes [BR:
pkr01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
AYO71_18265
Exosome [BR:
pkr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AYO71_18265
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AMT89383
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Position
4113215..4114387
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AA seq
390 aa
AA seq
DB search
MSQHDDKSQGFATRVIHAGQEPDPTTGALMPPIYANSTYLQDSPGVHKGFDYGRSHNPTR
FALERCVADLEGGTRAFAFASGLAAISTVLELLDAGSHIVSGNDLYGGTFRLFDKVRQRS
AGHRFSFVDLTDLSAFEASLQDDTRMVMVETPTNPLLSLSDLAAIARICRARGIICVADN
TFASPYIQRPLELGFDIVLHSTTKYLNGHSDVIGGIAVVGQNDELAEKLGFLQNAVGAIS
GPFDAFLTLRGVKTLALRMERHCSNALDLAQWLEQQPQVKRVYYPGLTSHPQHELAKRQM
RGFGGMISVDLNSDLAGARRFLENVKIFALAESLGGVESLIEHPAIMTHATIPPETRAKL
GIGDGLVRLSVGVEDVEDLREDLTQALAKM
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcacgacgataaatcccaaggcttcgccacccgggtgatccacgccggacaa
gagcctgacccgaccaccggcgcgctgatgccgccgatctacgccaactccacctacctg
caagacagccccggcgtgcacaaggggttcgactacggccgctcgcacaacccgacgcgt
ttcgcgctggagcgctgcgtcgccgacctcgaaggcggcacccgagcgttcgccttcgcc
tcagggctggcggcgatttccacagtattggaactgctcgacgccggctcacacatcgtc
tccggcaacgatttgtacggcggcacattccgcctgttcgacaaggtccgccagcgcagc
gccgggcaccgtttcagcttcgtcgacctgaccgatctgtcggcgttcgaagcctcgctg
caggacgacacgcgcatggtcatggtcgaaaccccgaccaacccgctgctgagcctgtcg
gatctggccgccattgcgcgcatctgccgtgcgcgcgggatcatctgcgtcgccgacaac
accttcgccagcccctacatacagcgcccgctggagctgggtttcgacatcgtcctgcac
tcgaccaccaaatacctcaacggccactccgacgtgatcggcggcattgccgtggtcgga
cagaacgacgagctggcggaaaaactcggtttcctgcaaaacgccgtcggggcgatttcc
gggccgttcgatgcattcctcaccctgcgcggggtgaagactttggcgctgcgcatggaa
cgtcattgcagcaacgccctggatctggcgcagtggctggaacagcaaccgcaggtcaag
cgcgtctactatccgggcctgacctcgcacccgcagcacgaactggccaagcggcaaatg
cgcggttttggcgggatgatttccgtggatctgaacagcgacctggccggcgcacggcgg
tttttggagaatgtgaagatctttgcgttggcggaaagtctgggcggtgtggagagcctg
atcgaacatccggcgatcatgacccacgcgaccatcccgccggaaactcgcgcgaagctg
gggattggcgatgggctggtgcggttgtcggtgggggttgaggatgttgaggatctgcgg
gaagatttgacgcaggctttggctaaaatgtga
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