Planococcus kocurii: AUO94_16500
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Entry
AUO94_16500 CDS
T04200
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pku
Planococcus kocurii
Pathway
pku03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AUO94_16500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pku03021
]
AUO94_16500
03400 DNA repair and recombination proteins [BR:
pku03400
]
AUO94_16500
Enzymes [BR:
pku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AUO94_16500
Transcription machinery [BR:
pku03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AUO94_16500
DNA repair and recombination proteins [BR:
pku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AUO94_16500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ALS80117
UniProt:
A0ABM5X0M8
LinkDB
All DBs
Position
complement(1640971..1644525)
Genome browser
AA seq
1184 aa
AA seq
DB search
MVGQLVQYGQHRQRRSFSRISEVLDLPNLIEIQSSSYEWFLEEGLREMFRDISPIEDFTG
NLSLEFVDYSLAEPKYPVDESKERDVTYAAPLRVKVRLHNKETDEVKEQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYFHDKTDKNGKKGFGATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLLGDNEFLQNTLEKDNTESTEKALLEIYERL
RPGEPPTVESAKSLLYSRFFDPKRYDLANVGRYKMNKKLHIKNRLFNQTIAETLADPETG
EILVEAGTLIDRRVLDRLIPNLENGVGFHTVSQVGGVLEGEVTLQSIKIYAPNNEDQKEI
TVISNAYIEDKIKNVTPADIISSISYFFNLLYGVGNTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSINDTQAIVPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINTLSTFAKVNKFG
FIETPYRRVDGETGLVTQHIDYLTADEEDNYVVAQANSKLNDDGSFVEEGIVARFRGENT
IYKRGSIDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLLNPEAPFVGTG
MEHLAARDSGAAVVAKNDGIVEFVEAKEISVRRIEVVDGNEVKGDLDVYRLQKFVRSNQG
TSYNQRPIVKVGDRISKRDILADGPSMERGEMALGRNVLVAFMTWDGFNYEDAIIMSERL
VKDDVYTSVHIEEYESDSRDTKLGPEEITRDIPNVGEDALRNLDDRGIIRVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKIFNREDGDEL
PPGVNQLVRAYIVQKRKISVGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMASRSLGIHMASSVFDGANEEDVLETMEESGMPLDGKTILYDGR
SGEAFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGESVPEPSVPESFKVLIKELQSLGMD
VKMLTIDDEEIELRDLDEEEDLQPADSLNILPIADKEAPVGTID
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttggtaggtcaactagttcagtacggtcaacatcgtcaacgcagaagtttttcgagaatc
agtgaagtgctggatcttccgaacttgatcgaaattcaatcatcatcttatgaatggttt
ctcgaagaagggcttcgcgaaatgttccgagatatttcaccgattgaagatttcacaggg
aatctatcactcgagtttgttgattacagtctcgcggaaccgaagtatccagtcgatgaa
tcgaaagagcgcgacgttacttacgcagcacctttgcgtgttaaagtgcgtctgcacaac
aaagaaacagatgaagtaaaagagcaggatgtcttcatgggagatttcccattaatgaca
gaaacgggtactttcgtcatcaatggcgcagaacgcgttatcgtttcccagttagttcgt
tcgccaagtgtttatttccacgacaagacagataaaaatggtaaaaaaggctttggagca
actgttatacctaaccgtggagcatggttggagtacgaaacagatgcgaaagatgtcgtg
tatgtcagaattgatcgtacacgtaaattgccagtaacagttcttttaagagctcttgga
tttggatcagaccaagaaatcattgatttgcttggagataacgaattccttcaaaacaca
cttgaaaaagataatacagagagcacagaaaaggcgcttcttgaaatttatgaacgcttg
cgccctggtgagccaccaacggttgaaagtgcgaagagcttactatattcacgctttttc
gacccaaaacgctatgacttagcaaatgttggtcgctacaaaatgaacaaaaagctccat
attaaaaaccgtcttttcaaccaaacaattgccgaaacattggcagatcctgaaacaggt
gaaattttagttgaagcagggacattaattgatcgtcgtgtactggatcgtttaattcca
aacttagaaaacggtgttggtttccatacggtttctcaagtaggtggcgttctagaaggt
gaagttactttacagtcgattaaaatttatgcgccgaacaacgaagatcaaaaagaaatc
actgtgattagtaatgcttatatagaagataagattaaaaatgtaacgccagcggatatt
atttcttctattagttacttctttaaccttctttacggtgttggaaacacagatgacatt
gatcatcttggtaaccgccgtttgcgttcagtaggtgagcttttacaaaaccaattccgt
attggtttgtctcgtatggagcgcgtcgtacgtgagcgtatgtcgattaacgatacacaa
gccatcgtacctcaacaattgatcaatatccgcccggttattgcatcaattaaagagttc
ttcggtagttctcagctttctcagtttatggatcaaacgaatccacttgctgaattgaca
cacaaacgccgtctatcggctcttgggcccggtggtttaacgcgtgaacgtgcaggtttt
gaagtgcgtgacgttcactattcacattatggccgtatgtgtccaattgaaacccctgag
ggcccgaacattggattgatcaatacactttcaacatttgcgaaagtgaataagttcggt
ttcattgaaactccttatcgtcgtgtagatggtgaaactggcttagttacacagcatatt
gattacttgactgcggatgaagaagataactatgtagtcgctcaagccaactcgaaatta
aatgacgatggatcatttgttgaagaaggcattgtggcacgtttccgcggggaaaacaca
atttacaaacgcggcagcattgactatatggatgtttctccgaagcaggtcgtttccgta
gcaacagcttgtattccgttcctagaaaacgatgactccaaccgagcattaatgggagcg
aacatgcaacgtcaagcagttcctttgttaaatccggaagctccttttgtaggaactgga
atggaacatttggcggcacgtgattctggtgcagctgtggtggcaaaaaatgacggtatt
gtagagtttgtggaagcaaaagaaatttcagttcgccgcatcgaagttgtggatggcaat
gaagttaagggtgacttggatgtctacagattgcagaaattcgttcgttcgaaccaaggg
acaagttataaccaacgcccaatcgttaaagttggagaccgtatttctaaacgtgatatt
ctagccgatggaccttcaatggagcgcggagagatggcattgggaagaaacgtactggta
gccttcatgacgtgggacggctttaactacgaagatgcgatcatcatgagtgaacgttta
gtgaaagacgatgtttacacatctgtccacatagaagagtacgaatctgattcacgtgat
acaaaacttgggccagaagaaattacgcgcgatattccgaacgtaggggaagatgcatta
cgtaacttggatgaccgtggaattatccgtgtcggagctgaagtaaaagatggagatatt
ctagttggtaaagtaacacctaaaggcgttactgaattaactgctgaagaacgtcttctt
catgctatttttggtgaaaaagcacgcgaagttcgcgatacatcgttgcgagttcctcac
ggtgctggcggtattgtattagacgttaaaatcttcaaccgtgaagatggagatgagtta
ccaccgggtgttaatcagctagtccgcgcatacatcgttcagaaacgtaaaatttctgtg
ggtgataaaatggccggtcgtcacggaaacaaaggtgttatttcaaggattttacctgaa
gaagatatgccattcatgcctgatggcacgccagtcgacattatgttgaacccactgggt
gtaccgtctcgtatgaatatcggtcaggtgcttgaattgcatcttggaatggcttctcgt
tcacttggaattcatatggcttcatctgtatttgatggagcgaatgaagaagatgtgttg
gaaacaatggaagagtcaggtatgccacttgatggtaagacgattctctatgatggccgt
tctggggaagcgttcgataaccgtgtgtctgtagggatcatgtacatgatcaaacttgct
cacatggttgacgataaattgcatgcccgttcaactggaccttactcattggttactcaa
caaccactgggtggtaaagcacaattcggtggacagcgttttggtgagatggaagtatgg
gcactagaagcatatggtgctgcacatacattacaagaaatcttaacagtcaagtcggat
gatgttgtaggtcgtgtgaaaacgtatgaagcaattgttaagggcgaaagtgtaccggaa
ccaagtgtaccggaatcatttaaagttctaatcaaagagcttcaaagtttaggtatggac
gttaagatgttgacgattgatgatgaagaaattgaattacgcgatttggatgaagaagaa
gatcttcagcctgcggattcattaaatatcctaccaatcgcagataaagaagcaccggtt
ggaacaattgattaa
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