Pichia kudriavzevii: C5L36_0D01480
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Entry
C5L36_0D01480 CDS
T06133
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
pkz
Pichia kudriavzevii
Pathway
pkz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C5L36_0D01480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkz03019
]
C5L36_0D01480
Messenger RNA biogenesis [BR:
pkz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
C5L36_0D01480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_8
TPR_14
TPR_1
TPR_17
TPR_11
TPR_16
TPR_22
TPR_CcmH_CycH
TPR_6
TPR_9
ANAPC3
TPR_Slam
ARM_TT21_2nd
ARM_TT21_N
NatA_aux_su
TAtT
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
40385241
NCBI-ProteinID:
XP_029322889
UniProt:
A0A2U9R7Q2
LinkDB
All DBs
Position
4:complement(284406..288773)
Genome browser
AA seq
1455 aa
AA seq
DB search
MSEKREKIKKQVQSLLKGAKKELVDKDYDGCIETCKSILKLDKTNFFCYLFLGKSFEAKK
RPGDALKAYQKATEIEPDQALGWKGQLSIKVEDPDFKSFFETVFLFTKLLISKKDPLTEA
VNYIKDYVGKHGLDFQPLKVYYLRQITPGLSELGDLIGYQIENPSTSIEALIKLYNNENS
TEIKKIKDSVKLSFSINMTESAKNEKYNEKIWPLLSESELPKLYELWIDLEQIDEKRYKI
QNEYLEFKYNLLFIAPVVEKPRLRAEIKDLVEGMVLIKCPSELAWKIHFDWLDPQSLAGL
DIVQVVDYINLFGKKRGFGAILYLYLISDISPFEKSKVAEYLAPGKEKAKGKTQVSKLET
EHPGKLLEDVPKTGANNQSYDIFDVTPQEIFTKMLSNLSQVKSSVLCCRIVLSYAIHLKD
YAYALDVSTDFTNALVLLQNSRGIVLSNSKMEQTLALAIIYTYYEAPKNFPKALSLYDSI
WRKDPNNTKVKIGKALILVETKKYDEAAEIFKSLITSDPTDVDATQEYGWCQIQLGNFEL
GREYIERAISTLQSEAYSKKSLNFMEVVSTLKYRLAMSYYMQFDGTSASLHNEATLKEYI
GKCSKLLIECLKISPNHAPSFTALGLLHYNYLGKKERAIKLFYKAFELDPSQIEASYKLA
EHFTSIGDWEMADLICKSVTENSKAKRQLSSSYSNIKDKAWPYRVLGCASMEFKEDVKAI
EYFQSALRMDSSDISSWIGLGEAYMSRGRLEASVKVFTHVIKLQSGVLEKDVEITPEMEK
KADWHVVYLLAVALTNMLEFENSIRILTNLLDTNEEQRNNSCILTLLIETLILRCDAEIE
RGAILRASDTLLSTFSYLFHAFDLENKSTKLWKALGDLLRIALTVRSSISRVPFSKVHNL
VSNFMTEKDEMWELVNFEEFQIDDLMKKEKFPEVCHIYYSLSCIGGYLCTKEGAVKTLRS
SLLFNIAISFISWYRDSLRERYVDTSIRLLNKCVKLEPENSEYWNCLGIVSMGKNPKVSQ
HCYIKAISIESKSPIYWFNLGMLYIKYGDYELAKNCFTRAQSIGATNCVPWAGHALICKK
AGDIENARNLFTHSYVLSRGTNPSMTILYAISVLEEIVSEGDDERNLEAVEKLTSVNYGM
INYLKLFPSDTFALELTVKIIERLYSFNSGIEYSKNLCQLYEQEYEETESERILINYCMA
KCQYSRFLLAKQEYVKASEVCDDVGSLLDTISDITMQVQRCMLSCFTVFGLSLYFQGDYE
RSLEEFRKLVDAFPENERIVVLISQVLFASGDEAAKQEAMDELLNNIATQGTSLIVAMTI
AAISLVEDLTEYIDAVKEVLDQLPLDTLIRDSHREIPKLLIMISKRITAKQPGTRVNRTW
QRNAVLFPGDISVWSHVDSEVALELSIHTKKDCAMDVSDAYAKVKRLREAQRSILLSGGV
NEKALAELFSLVGKA
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaagagagaaaagataaagaaacaggtacagtctttgttgaagggggccaag
aaggaacttgttgacaaggattatgatggatgtatcgaaacctgtaaaagcattctgaaa
ctcgacaagactaactttttttgttatctctttttgggtaaatcgtttgaggcgaagaag
aggccaggagatgcattgaaggcatatcagaaggctacagagatagaacccgatcaagct
cttggatggaagggtcaattatcgatcaaagttgaggaccctgactttaaatcatttttt
gaaacggtattcttgtttaccaagctcttaatatctaaaaaagacccactcactgaggct
gtcaattacatcaaggactacgtcggaaaacacggtcttgattttcagcctctgaaagta
tattatttaaggcaaatcactcccggtttaagtgaattgggtgatttgattggttaccaa
attgagaatccttcgacttccattgaagctctaattaaattgtacaacaatgagaattcg
acagaaataaagaaaataaaggactctgtcaagttgtccttctctataaacatgacggaa
agcgccaagaacgaaaaatataatgagaaaatatggccacttctatcagaatcagagctc
cctaaactttatgaactgtggattgatttagaacagattgacgaaaaaaggtacaagatt
caaaatgaatatttagaattcaaatacaacctattattcattgctcctgtagtagaaaaa
cccagactgagagcggaaattaaggacttggttgagggtatggtattgatcaaatgccct
tctgaattggcatggaaaatacactttgactggctggatcctcaatcacttgctggtctg
gatattgttcaagttgttgattacatcaatttgtttgggaaaaagaggggatttggtgct
attttatacctatatttaatctccgatatttcaccctttgaaaaatcaaaagttgcagaa
tacctagctcccggaaaagaaaaagccaaaggaaaaacccaggtttcaaaattagaaact
gaacacccgggaaagttattagaagacgtgccaaaaactggggcaaacaaccaaagttac
gacatttttgacgtcactccacaagaaatattcactaaaatgctttctaacttatctcaa
gtgaaaagctctgtcttatgttgcagaattgttcttagctatgccatccatcttaaagat
tatgcgtatgccttggatgtctctaccgatttcactaatgctttagttttactacagaac
agcaggggaatagttttatctaattcaaaaatggagcaaactctagctttggcaattatt
tacacctattatgaagctccaaagaatttccctaaggcattatctctatacgattccatt
tggaggaaagatccgaataacaccaaggttaaaatcggtaaggcattaattcttgtggag
accaaaaagtatgatgaagccgccgaaatttttaagagtttgataacttccgatccaaca
gatgttgatgccactcaggaatacggttggtgccagatccaacttggcaactttgagttg
ggaagagaatatatagaacgtgccatctcaactcttcaaagtgaggcgtattcaaagaag
agcttaaattttatggaagttgtttcaactctaaaatacagattagcaatgtcctactat
atgcagtttgatggtacttcagcaagtcttcacaatgaagcaaccttgaaggagtatata
ggtaaatgttcaaagctgcttatagaatgtctaaaaatctcacctaatcatgcaccatca
tttactgctctcggattgcttcattataactacttaggtaaaaaggagcgtgcaattaag
ttgttttacaaggctttcgaacttgatccttctcaaatagaagcttcttataaactagct
gagcatttcacttcaattggagattgggaaatggccgatttgatctgcaaatcagtcacc
gagaattctaaggcaaagcgccaattaagttcaagttactcgaatataaaagacaaggca
tggccttacagagtgttaggatgtgcttctatggaattcaaggaggatgttaaagcaatc
gaatatttccaaagtgcgttaagaatggactcttctgatatttcttcctggataggttta
ggggaagcatacatgtcaagaggtagattggaagctagtgttaaggtctttactcatgtc
atcaaattacagtcgggtgttcttgaaaaagacgtagaaattactccagaaatggagaaa
aaagcggattggcatgttgtttatttgctagcagtagctttaacgaatatgcttgaattt
gaaaatagtatcagaatactaaccaatttgttggataccaacgaagagcaaagaaacaat
tcatgcattctaacattacttattgaaaccttgatcctgagatgcgatgcggaaattgaa
aggggtgcgattttaagagcttcggacacattgttatcaacatttagttatttattccat
gcttttgatcttgaaaataaatctaccaaactatggaaagccctaggtgatctattgaga
atagcgttgacagtcagatcatccatatcaagagttccattttcgaaggtccataatttg
gtaagtaacttcatgacggaaaaggatgaaatgtgggaactggtaaattttgaagaattt
caaattgatgatttgatgaaaaaggagaagtttcctgaagtttgccatatttattactct
ctttcctgcatcggagggtatttatgcactaaagaaggcgccgtgaaaactttacgttct
agtttgctttttaacattgcaatctcatttatttcatggtacagagattctctccgtgaa
aggtacgtggacacctcaataagattattgaataaatgtgtcaaattagagccagagaat
tcagaatattggaattgtttaggtatagtgtcaatgggtaaaaacccaaaggtatcacaa
cactgttatattaaagcgatctctattgaatccaaatcgccaatatattggtttaacctc
ggtatgctctatatcaaatacggagattatgaattagctaagaattgctttaccagagcg
cagtccattggtgccaccaattgcgttccatgggcaggtcacgctttgatttgcaaaaag
gccggtgatattgaaaatgctagaaatcttttcacacattcttatgtcttgtcaagagga
acaaatccatccatgacgattttgtacgctatctctgtattggaggaaattgtttctgaa
ggcgacgacgaaaggaacttagaagccgttgaaaagctgacttcagttaattatggaatg
ataaactatttgaagttattcccatcagatacttttgctcttgaactaaccgttaaaatt
atagaaagactctactcttttaatagtggtattgaatattcaaagaatctgtgccagtta
tatgagcaggagtacgaggaaacagaaagtgagaggatattgatcaactattgtatggcg
aaatgccaatattccagatttctacttgcaaagcaagagtatgttaaggcttccgaagta
tgtgatgatgttggctcgttgttagatacaatatcagatataactatgcaagttcaaaga
tgcatgttgtcttgtttcactgttttcggattatcactatacttccaaggagattacgaa
aggtcacttgaagagtttaggaagctagtcgatgccttcccagagaatgaaagaattgtt
gttttaatatcccaggtgctgtttgcatctggagatgaggctgcaaaacaagaagctatg
gatgaattactgaacaacattgcaacgcaaggcacttcattgatagtcgcaatgaccatt
gctgctatatcattggttgaagacttgactgaatacattgatgcagtcaaggaagttttg
gatcaattacctttagatacattaatcagggattcacatcgggaaatcccgaagctattg
atcatgatatccaagagaattacagccaaacaaccaggtacaagggtcaatagaacatgg
cagagaaatgcagtgttattcccaggtgacatttcagtctggagccacgttgacagtgaa
gttgcactggaattgtctatccatactaagaaggactgtgcgatggatgtttctgatgct
tacgcaaaggtgaaacgacttagagaggcacagagaagtatccttttaagtggaggagtc
aacgagaaagcacttgcagagcttttctcccttgttgggaaggcatga
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