KEGG   Poecilia latipinna (sailfin molly): 106936917
Entry
106936917         CDS       T08005                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai04510  Focal adhesion
plai04512  ECM-receptor interaction
plai04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:plai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106936917
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106936917
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106936917
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:plai00535]
    106936917
Proteoglycans [BR:plai00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   106936917
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 106936917
NCBI-ProteinID: XP_014873662
LinkDB
Position
Unknown
AA seq 682 aa
MAGFAGIKGSFLVVILQLVLLCFSQTNQGPSGPPGPPGVPGVPGVDGIAGERGLDGQDGF
PGPDGDAGKPGSSGLPGIPGNDGLTGPVGDPGPDGPPGQKGEPGKSGPRGAAGVGPDGSP
GPPGPGGLLGELGKVGPPGAMGVRGPQGPRGPSGPRGAAGMLGTSDLCPNSCPPGTPGHP
GLPGMKGHKGVKGEAGEPGKQGHKGEEGDQGGPGDVGSQGPAGPQGIRGATGMMGPKGEI
GARGPDGDPGPQGVAGATGDRGQRGVMGEPGIKGEMGALGPRGITGLPGPKGEAGLPGVD
GRDGIPGLPGAKGNIGRPGVPGEIGLQGLPGLPGTPGPKGLSGPKGDAGKPGFPGSLGSA
GKQGERGEQGEVGPIGPIGEPGNPGEQGPVGPAGKPGARGPKGDPGLPGLPGPPGLPGVK
GERGERGEAGPKGEQGAQGDEGNPGELGELGDAGESGPKGEAGIPGEPGKRGPEGSRGQP
GIEGPPGTPGPRGMQGNRGPRGVRGSQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRR
PESGIAGLPGKPGPPGSPGPPGDNGFPGQAGARGLPGLKGPPGPMGNKGPKGDMGDRGSR
GPTVRGPKGQSGPPGLPGEPGKPGYGQDGQDGQRGPPGVPGQPGVPGPPGPAGLNGYCDP
SACNLQAGAVQQSLDVKGPAGN
NT seq 2049 nt   +upstreamnt  +downstreamnt
atggctgggtttgcaggcattaaagggtcttttctggtggtgatcctgcagcttgttctc
ctctgcttctctcaaacgaatcaagggccctctggcccacctggacccccaggagtccca
ggagtcccaggagttgatggcatagctggtgaacgggggttagacggccaggacggtttt
cctggccctgatggggatgcaggtaaacccggttcttcagggttacccggaattcctgga
aatgatggtttgaccggccctgttggggaccctgggcctgacggtcccccgggacagaaa
ggtgaacctggaaagtccggacctcgcggagctgctggtgttgggcctgatggatcccct
ggaccacctgggcctggaggacttctgggtgaactgggaaaagttggacctcctggagca
atgggtgtgagagggccacaaggaccccgtggaccatcggggcccagaggtgcagctggg
atgcttggtacttccgacctgtgtccaaactcttgtccacctggcacccctgggcatcct
ggtctacctggtatgaagggtcacaaaggcgtgaaaggtgaagcaggagaacctgggaaa
cagggacacaagggtgaggaaggagaccagggaggtccaggagacgttgggtcccagggt
ccagcgggcccacagggaatacgtggagccacgggaatgatgggccccaagggggaaata
ggagctcgaggtcctgacggagatccaggtccacagggagttgcgggggcgactggagac
aggggtcaaagaggagtgatgggggaacctgggattaaaggtgaaatgggtgctttaggg
ccacgggggatcacagggcttccaggtccaaaaggagaagctggattacccggtgttgac
ggccgtgatggcattcctgggctgccgggtgcaaagggaaacatcggcaggccgggcgtt
cctggagagattggacttcaggggcttcctggtttgcctggaacacctggaccaaaaggg
ttgagtggcccaaagggagatgctgggaagcctgggtttcctgggtcattgggatcagct
ggaaaacaaggtgaaaggggagaacagggagaagtgggacccatcggacccatcggtgag
cctggcaatcctggagagcaaggtcctgtaggtccagctggcaagccaggtgcaagggga
ccaaaaggtgatcctggtcttcctggtctcccagggcccccaggcctgcctggagtgaag
ggagaaaggggtgagcgtggagaagcaggacccaaaggagaacaaggggctcaaggtgat
gagggaaatcctggagagctaggggaacttggagatgctggggaatctggaccaaaagga
gaggctggtattcctggtgaacctggcaaaaggggtcctgagggaagtcgaggccagcct
ggcatcgagggcccccctggcacacctggaccacgaggcatgcaggggaacagaggtcct
cggggggtccgagggtctcaggggcctgcgggcaaggagcccagcgatcagcacatcaag
caagtctgcatgcgagttatgcaagagcagctggctcagttagctgctagtctaaggagg
ccagagtctggcattgcaggtttaccgggaaaacctggccctcctgggtctccgggaccc
ccaggagacaacggttttccagggcaagctggagcaaggggccttccaggactcaaagga
ccaccagggccaatgggaaataaaggtcccaaaggtgacatgggagatagaggttccaga
gggcccactgtacggggacctaaaggccagtcaggacctcctgggcttccaggagagcca
gggaaacctgggtatggtcaagatggtcaggatgggcagaggggacctcctggcgtgcca
ggacagcctggcgtgcctggtcctcctggtccagccggcctgaacggctactgtgacccg
tcagcctgcaacctccaggcaggagctgtccagcagtctctggatgtgaagggacctgca
gggaactaa

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