Poecilia latipinna (sailfin molly): 106936917
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Entry
106936917 CDS
T08005
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04510
Focal adhesion
plai04512
ECM-receptor interaction
plai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106936917
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106936917
09142 Cell motility
04820 Cytoskeleton in muscle cells
106936917
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plai00535
]
106936917
Proteoglycans [BR:
plai00535
]
Extracellular matrix (ECM) proteoglycans
Others
106936917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106936917
NCBI-ProteinID:
XP_014873662
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MAGFAGIKGSFLVVILQLVLLCFSQTNQGPSGPPGPPGVPGVPGVDGIAGERGLDGQDGF
PGPDGDAGKPGSSGLPGIPGNDGLTGPVGDPGPDGPPGQKGEPGKSGPRGAAGVGPDGSP
GPPGPGGLLGELGKVGPPGAMGVRGPQGPRGPSGPRGAAGMLGTSDLCPNSCPPGTPGHP
GLPGMKGHKGVKGEAGEPGKQGHKGEEGDQGGPGDVGSQGPAGPQGIRGATGMMGPKGEI
GARGPDGDPGPQGVAGATGDRGQRGVMGEPGIKGEMGALGPRGITGLPGPKGEAGLPGVD
GRDGIPGLPGAKGNIGRPGVPGEIGLQGLPGLPGTPGPKGLSGPKGDAGKPGFPGSLGSA
GKQGERGEQGEVGPIGPIGEPGNPGEQGPVGPAGKPGARGPKGDPGLPGLPGPPGLPGVK
GERGERGEAGPKGEQGAQGDEGNPGELGELGDAGESGPKGEAGIPGEPGKRGPEGSRGQP
GIEGPPGTPGPRGMQGNRGPRGVRGSQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRR
PESGIAGLPGKPGPPGSPGPPGDNGFPGQAGARGLPGLKGPPGPMGNKGPKGDMGDRGSR
GPTVRGPKGQSGPPGLPGEPGKPGYGQDGQDGQRGPPGVPGQPGVPGPPGPAGLNGYCDP
SACNLQAGAVQQSLDVKGPAGN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtttgcaggcattaaagggtcttttctggtggtgatcctgcagcttgttctc
ctctgcttctctcaaacgaatcaagggccctctggcccacctggacccccaggagtccca
ggagtcccaggagttgatggcatagctggtgaacgggggttagacggccaggacggtttt
cctggccctgatggggatgcaggtaaacccggttcttcagggttacccggaattcctgga
aatgatggtttgaccggccctgttggggaccctgggcctgacggtcccccgggacagaaa
ggtgaacctggaaagtccggacctcgcggagctgctggtgttgggcctgatggatcccct
ggaccacctgggcctggaggacttctgggtgaactgggaaaagttggacctcctggagca
atgggtgtgagagggccacaaggaccccgtggaccatcggggcccagaggtgcagctggg
atgcttggtacttccgacctgtgtccaaactcttgtccacctggcacccctgggcatcct
ggtctacctggtatgaagggtcacaaaggcgtgaaaggtgaagcaggagaacctgggaaa
cagggacacaagggtgaggaaggagaccagggaggtccaggagacgttgggtcccagggt
ccagcgggcccacagggaatacgtggagccacgggaatgatgggccccaagggggaaata
ggagctcgaggtcctgacggagatccaggtccacagggagttgcgggggcgactggagac
aggggtcaaagaggagtgatgggggaacctgggattaaaggtgaaatgggtgctttaggg
ccacgggggatcacagggcttccaggtccaaaaggagaagctggattacccggtgttgac
ggccgtgatggcattcctgggctgccgggtgcaaagggaaacatcggcaggccgggcgtt
cctggagagattggacttcaggggcttcctggtttgcctggaacacctggaccaaaaggg
ttgagtggcccaaagggagatgctgggaagcctgggtttcctgggtcattgggatcagct
ggaaaacaaggtgaaaggggagaacagggagaagtgggacccatcggacccatcggtgag
cctggcaatcctggagagcaaggtcctgtaggtccagctggcaagccaggtgcaagggga
ccaaaaggtgatcctggtcttcctggtctcccagggcccccaggcctgcctggagtgaag
ggagaaaggggtgagcgtggagaagcaggacccaaaggagaacaaggggctcaaggtgat
gagggaaatcctggagagctaggggaacttggagatgctggggaatctggaccaaaagga
gaggctggtattcctggtgaacctggcaaaaggggtcctgagggaagtcgaggccagcct
ggcatcgagggcccccctggcacacctggaccacgaggcatgcaggggaacagaggtcct
cggggggtccgagggtctcaggggcctgcgggcaaggagcccagcgatcagcacatcaag
caagtctgcatgcgagttatgcaagagcagctggctcagttagctgctagtctaaggagg
ccagagtctggcattgcaggtttaccgggaaaacctggccctcctgggtctccgggaccc
ccaggagacaacggttttccagggcaagctggagcaaggggccttccaggactcaaagga
ccaccagggccaatgggaaataaaggtcccaaaggtgacatgggagatagaggttccaga
gggcccactgtacggggacctaaaggccagtcaggacctcctgggcttccaggagagcca
gggaaacctgggtatggtcaagatggtcaggatgggcagaggggacctcctggcgtgcca
ggacagcctggcgtgcctggtcctcctggtccagccggcctgaacggctactgtgacccg
tcagcctgcaacctccaggcaggagctgtccagcagtctctggatgtgaagggacctgca
gggaactaa
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