Poecilia latipinna (sailfin molly): 106939206
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Entry
106939206 CDS
T08005
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
106939206
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plai04040
]
106939206
Ion channels [BR:
plai04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106939206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
106939206
NCBI-ProteinID:
XP_014877011
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MFSWVVKVVPQPAEAPAAAESVKNNEAKNASAKSPEEASEDGQNNGGVMGWLSNGFVSAL
PQPPGSPLLKGSNADCRPGDDGDRNGVMGWVAQGLTKVLPQPDEKYREAAETQNAAEEHT
EVFEAATMPDYDPLPHIPVVEVVSEEEVSEVESLAPQFHPKVVSWIKQIVPQPVILPPGG
VPVEAPPKVSRSSLDKVLSPPPESLSGISLDTDSRAGVVDWFVSGLGLKMPQLVLPPKDE
AEGAAEVLQKASSKLNPDMVLEDMESDNEGQNCPKAAGSQGPAGDPAQQERGRSGSVEAL
DNCAAPQAPQAPQAPQAPQAPQAPQAPASDSGTKTSQEDAETQTGRWTPFIESIKKEAEG
VALASMEERLLQERMEMARLAEEVARQTAEMAVRQMASEGTSIKLSLESQELLEEPEAEL
PAAPEEDSKLEPGADAEKDGSGLQDEQKAEEPTVQEAGRDTAEEQQEEPEPEPEPEPEPE
KQEVCAAAVTEQPQKANDAPTSNTEKDEDASGDGCGEPSLSLRPAVSVEDVDQEGGGGAG
GDESSSPALDPKLSTLTVPVAPAGGRQSRGDKDGGRKRRTVWTKSRNLQAQSEDDDDEVS
IPVRAWPSESSLCSADSMLRERPASAASQTSQTSAVVSERLQELVRMFKERTEKAKEKLI
DPDSSDEESVIAAPPQPPAAPQGEEEEDEEEGRLGGQCVGGAGSGAGSRVSGGKQIRWIR
ACWPIRFPASIDPFTNILYVLWMFLVSAAWNWNVWLIPVRWAFPYQTPQNAPYWLLADYT
CDLIYILDIAVFQPRLQFVSGGDIVCDKKEMRKNYMKTKRFKFDVASLAPLELLYFKTGI
NPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTTYLLYCLHCNACLYHWASSYIG
LGATQWVYNGVGNSYIRCYYFAVKTLITIGGLPDPTSLFEIVFQLINYFVGVFAFSIMIG
QMRDVVGAATAAQTYYRTCMDNTIKYMTSYRIPKDVQNRVKTWYNYTWQSQGMLDEQELL
TQLPDKMRLDIAVDVNYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGR
EMYIIKAGEVQVVGGPDERTVFATLRAGSVFGEISLLAVGGVNRRTANVISHGFANLFIL
DKKDLNEILVHYPESKKLLRKKARKMLNKGKKPEPKEEAKEPAPVPAASLKSETPRLLRA
ALEMTERSSGLKGALARVKERSSKSSISLQRSLSASLRPPDPVLSPRPDLDMSLSASSMT
LRSASRSCNPADFPPAQLQLQRGVAGWDESEDEWDEGGRGE
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctgggtggtgaaggtcgttcctcagcctgctgaagctccggctgctgctgag
tcggtgaagaacaatgaagccaagaatgcttcagcgaagagccctgaggaagcctcagag
gacggccagaacaacgggggagtgatgggctggctgtccaacggcttcgtcagcgcgctg
ccgcagccgccggggtcgcctctgctcaaggggtccaatgcagactgcaggccaggagac
gatggagatcggaacggcgtgatgggctgggtcgctcagggtctgaccaaggttctgcct
cagccggatgagaagtaccgagaagcggctgagacccagaatgccgccgaggagcacacc
gaggtgtttgaggcagcgacaatgccagattatgacccgcttcctcacatcccggtggtg
gaggtggtgtcggaggaggaagtgtcggaagtggagagtttggctcctcagttccatcca
aaggtggtgagctggataaagcagatagtccctcagccagtgattctgccccctggtggc
gtacctgtggaagcaccaccaaaagtctctcgctcctctctagacaaagtgctgtcgcct
ccgccggagtctctcagtgggatttcactggacaccgacagcagagctggagtggtcgac
tggttcgtgtccggcctgggtctgaagatgccgcagcttgtcctgccacccaaagatgaa
gctgagggagcagctgaagtgctgcaaaaagcttcctccaaactgaatcccgacatggtt
ctggaggacatggagtcggacaacgagggccagaactgccccaaagctgcaggatcccag
ggtccagcgggtgacccggcccagcaggagagagggaggtccggctctgtggaggctctg
gacaactgcgccgccccgcaggccccgcaggccccgcaggccccgcaggccccgcaggcc
ccgcaggccccgcaggccccagcttcagacagcgggacaaaaacatctcaggaagacgca
gagacccagacgggccgctggacaccattcatcgaaagcatcaagaaggaggctgaaggc
gtggcgctggcctccatggaggaacgcctgctgcaggagcgcatggagatggcccgcctg
gctgaagaggtggcccggcagacggcagagatggcagtgaggcagatggccagcgaggga
acctccatcaaactctccctggagagccaggagctactggaggaaccggaggcagaattg
ccagcagcaccagaagaagacagcaagctagagccaggagctgatgcagaaaaggacggg
tccgggctccaggacgagcagaaagccgaagaaccgacagtccaggaagcaggtagagac
acagctgaagagcagcaggaggaaccagagccggaaccagaaccagaaccagaaccagaa
aagcaggaagtgtgtgcagcagctgtgacggagcagccgcagaaagcaaacgatgctccg
acttctaacacagaaaaggatgaagatgcttctggagacggctgtggagagccgagcctc
agcctccggcccgcggtgagcgtggaggatgtcgaccaggagggaggaggaggagcagga
ggtgatgagagcagcagcccggccctggacccgaagctcagcaccctgacggtccccgtg
gccccggcaggaggccgccagagtagaggagataaagacggtgggaggaagcgtcggacc
gtctggaccaagtccagaaacctgcaggcccagagcgaagatgatgatgatgaagtcagc
ataccggtccgagcctggcccagtgagtccagtctgtgcagcgccgacagcatgctgagg
gagcgcccagcctctgctgccagtcagaccagtcagaccagtgctgtggtcagtgagcga
ctccaggaactggtcaggatgttcaaagagaggacagagaaagccaaagagaagctgatc
gacccggacagctccgacgaagagagcgtcatcgctgctccccctcagcctccagctgcc
ccccagggtgaggaagaggaggatgaggaggaaggcaggttaggaggtcagtgtgtcggc
ggggcaggaagcggggcagggagcagggtgtctggaggaaagcagattcggtggatccgg
gcctgctggccgatccgattccccgccagcatcgaccctttcaccaacatcctgtatgtt
ctgtggatgttcctggtttctgcggcctggaactggaacgtgtggctgatcccggtccgc
tgggcgttcccctaccagacgccccaaaacgccccctactggctgctggccgactacacc
tgcgacctcatctacatcctggacatcgccgtgtttcagccgcgcctgcagttcgtcagc
ggaggagacatcgtgtgtgacaagaaggaaatgagaaagaattacatgaaaacaaaacgc
ttcaagttcgacgtggccagcctcgctcctttagagctgctgtactttaagacgggcatc
aaccctctgctgcggttacctcgcctgctgaagatcaactcattttttgagttcaatgag
cgactggaggccatcctgaccaaagcctacatctacagggtgatccgaaccaccacatat
cttctctactgtcttcactgcaacgcctgcctctaccactgggcgtcctcctacatcgga
ctcggggccacgcagtgggtctacaatggggtcggcaacagttatattcgctgttactac
tttgcggtgaaaactctgatcaccatcggcggtctgccggatcccacctccctgtttgag
atcgtattccagctcatcaactacttcgttggagtcttcgctttctccatcatgattggt
cagatgcgtgatgttgtcggtgcggccaccgcggctcagacctactaccgcacctgcatg
gacaataccatcaaatacatgacgtcctaccgcatccccaaagacgtccagaaccgcgtc
aagacctggtacaactacacctggcaatcacaaggcatgctggatgagcaggagcttctg
acccagctgccagataaaatgcgtctggacatcgctgtagacgtcaactactccatcgtg
agcaaagtccctctgttccagggctgtgacaggcagatgatctttgacatgctgaagagt
ctgcgctcggttgtctacctgcctggagattacgtctgcaaaaagggcgaagtgggtcgg
gagatgtacatcatcaaagcaggggaggtgcaggtggttggaggtcccgatgagaggacg
gtgtttgctacgctgagagcaggatccgtgtttggagagataagtttgctagcggtgggc
ggagtcaaccggcgcacggccaatgtgatctctcatgggtttgcaaacctgttcatcctg
gacaagaaagacctgaatgagattctggtccactaccccgagtccaagaagctgctgcgc
aagaaggccaggaagatgcttaataagggcaaaaagcctgaacccaaagaggaagctaag
gaaccggctccggtaccagcagcttctctcaagtccgagacgcccagacttctgcgagcg
gctctggagatgacggagaggtcatctggactgaaaggagctctggctcgggtcaaagag
aggagcagcaagtccagcatctcactgcagcggtccctctccgcctcgctgcgtcctccg
gaccccgtcctcagccccagaccggacctggacatgtccctctctgccagctccatgacg
cttcgctcagcttctcggagctgcaaccctgccgattttcctcctgcgcagctgcagctg
caacgcggcgtggcgggatgggatgagagcgaggatgagtgggatgaaggaggaagaggg
gagtga
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