Candidatus Planktophila dulcis: A1s21155_03485
Help
Entry
A1s21155_03485 CDS
T05051
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
plak
Candidatus Planktophila dulcis
Pathway
plak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A1s21155_03485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plak03400
]
A1s21155_03485
Enzymes [BR:
plak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
A1s21155_03485
DNA repair and recombination proteins [BR:
plak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A1s21155_03485
Prokaryotic type
A1s21155_03485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASY12028
UniProt:
A0AAC9YUY5
LinkDB
All DBs
Position
complement(689376..690020)
Genome browser
AA seq
214 aa
AA seq
DB search
MKDHASLHVHSSWDPIFKPLQGQIDSVMRSLEDEECAPPKESIFAAFQMDLALVRCVIVG
QDPYPTPGNAMGLAFSMNANVSKIPASLKNIFSELESDQGIASPASGDLSRWMQSGVLLL
NRVLTTRAGESNAHAAFGWQKITDHIAQELGKRGVVAILWGNQAQELSRYFPLRVEGVHP
SPLSAYRGFFGSRPFSQVNELLTSSGRTPIDWSL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggatcacgcttctttgcacgtgcactctagctgggatccgatatttaagccgctt
caaggacagatcgattcagttatgcggtctctcgaagatgaagagtgcgcaccacctaaa
gaatcaatatttgcagcctttcagatggaccttgccttagttcgctgtgtgattgtggga
caagatccttatccaacaccgggtaatgcgatgggacttgccttttcaatgaatgcaaac
gtcagcaagattccagcgagtttgaaaaacatcttttctgaactagaaagcgaccaagga
attgcatctcccgcttccggtgatttatctcgctggatgcaatctggggtattgctattg
aatcgtgttctcacaactcgtgcgggggagtcaaacgctcatgcagcttttggttggcaa
aaaatcacagatcacatagcgcaagagctcggtaagcgtggggttgtcgcaatattgtgg
gggaatcaagcacaggaactttctcgatatttcccattacgcgttgaaggagtgcatccg
agtccactcagtgcctatcggggattcttcggctctcgtccattttcacaagtaaatgaa
ctgctcacatcaagtggccgcactccaatcgattggtctctctaa
DBGET
integrated database retrieval system
