Candidatus Planktophila lacus: A1s21148_02945
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Entry
A1s21148_02945 CDS
T05050
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
plan
Candidatus Planktophila lacus
Pathway
plan00300
Lysine biosynthesis
plan00550
Peptidoglycan biosynthesis
plan01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plan00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A1s21148_02945
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A1s21148_02945
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plan01011
]
A1s21148_02945
Enzymes [BR:
plan01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
A1s21148_02945
Peptidoglycan biosynthesis and degradation proteins [BR:
plan01011
]
Precursor biosynthesis
Amino acid ligase
A1s21148_02945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ASY10500
LinkDB
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Position
581710..583206
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AA seq
498 aa
AA seq
DB search
MMRPFSQSTLKLTKVAGAVSATCELSEAELSKIEISGLTHNDSQVEPGDLFIAIPGANRH
GAEFAMSAVSKGAVAILTDSAGAAYVQGIPVLVVADPRRVAGNIAALFYNEPMRDLSSIG
ITGTNGKTTVSTLIYQIFEAAGRDSGLIGTIETRIGKDAVESSRTTPEATDLQALSAVMR
ERHMRHLVMEVSSHAMVLHRMQGAHFAFVGFTNLTQDHLDFHGDIESYFAAKAKLFTYEF
ADQAVINIDTEYGARLADKTELPVISLSRLNPQATWHFAEIDTSGKQVHFKIRGSGGMLI
ESSTKLRGGYNLDNLLMAIAVAVESGVDPVDIAAAVPALSGAAGRLEEVSVGQSYSAFVD
YAHTPDAVSNVLESIREFTSGKVIAVLGCGGDRDSSKRPLMGQALLKGCDIAVFTSDNPR
SEDPSQILKEMVGKLKVSEPARVIEDRKSAIEYAVSLASQGDTIAILGKGHELGQEIAGK
KLDFDDRKVLAQAIAGVK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ataatgcgcccatttagccagagcactttaaagttaacgaaagtcgccggcgctgtctct
gcaacctgtgaattaagcgaagcggaactttctaagatagaaatttccggcctcactcat
aacgattctcaagtagaacccggagatctctttattgcgataccgggtgctaatcgccat
ggtgcagagtttgcgatgagcgcagtaagtaaaggcgcggtagcgattttgaccgatagt
gcaggagccgcttacgttcagggcatcccagttctagttgtggcggatcctcgccgcgtt
gcgggcaatatcgctgctctgttctacaacgaaccaatgcgcgatctatcgagtatcgga
attaccggtacaaatggcaagacgactgtatctactttgatttatcaaatattcgaagca
gctgggcgcgatagcgggctaatcggaacgatcgaaacacgtatcggaaaagatgccgtc
gagagttcgcgaaccacaccggaggccacagatttgcaagcgctctcggcggtaatgcgc
gagcgacatatgcgccatctagttatggaagtctctagccatgccatggtcttacatcgc
atgcaaggcgcacatttcgcctttgtgggtttcacaaacttgactcaggatcacctagat
tttcacggagatatcgagagttactttgcagccaaagccaagttgtttacctacgaattt
gcagatcaagccgtcatcaatatagatactgaatatggcgcaaggttggctgataaaact
gaacttccggttatctctctatctcggctaaatccgcaagccacttggcactttgcagaa
attgatacctctggaaagcaagttcactttaaaattcgtggctctggcggaatgcttatt
gaatcctcaacaaaacttcgcggtggctataacttggataaccttttaatggctatcgct
gtcgcagttgaatctggtgtcgacccagtcgatattgcagccgctgttccggcgctatca
ggtgcagcaggtcggctagaagaggtaagcgttggtcagagttattcggcctttgttgac
tatgcgcacactcctgatgcagtctctaacgtgctcgaatcaattcgcgaatttacatct
ggaaaagttatcgccgtgctcggttgcggtggggatcgcgattcctcaaagcgtcccttg
atggggcaggcacttctcaagggttgcgatattgcagtgtttaccagtgataacccgcga
tctgaagatccaagccagattctcaaagagatggttggtaagttaaaagtttctgagcca
gcaagagtaattgaagatcgcaagagcgcgattgagtacgccgtttctttggcatcgcaa
ggagacacaattgcgatcttgggtaagggccatgaactcgggcaagagattgctggaaag
aaattagattttgatgatcgcaaagttttggcacaggcgattgcaggtgtgaaatga
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