Pleomorphomonas sp. SM30: OHA_1_03007
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Entry
OHA_1_03007 CDS
T05766
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pleo
Pleomorphomonas sp. SM30
Pathway
pleo03030
DNA replication
pleo03430
Mismatch repair
pleo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OHA_1_03007
03430 Mismatch repair
OHA_1_03007
03440 Homologous recombination
OHA_1_03007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pleo03032
]
OHA_1_03007
03400 DNA repair and recombination proteins [BR:
pleo03400
]
OHA_1_03007
Enzymes [BR:
pleo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OHA_1_03007
DNA replication proteins [BR:
pleo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OHA_1_03007
DNA repair and recombination proteins [BR:
pleo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OHA_1_03007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BBE73396
LinkDB
All DBs
Position
1:complement(3299382..3300425)
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AA seq
347 aa
AA seq
DB search
MVAVKAQDADRVVARPPAEVSFYLVYGPDAGLVAERAEKLAAAAADPADPFSLIRLEAAQ
VASDPNRLPDEAYAVSMFGGRRAILVRDAGSRPSLAGILTPLIKSPPPETTFVLDAGDLK
KTNPIRTLFERERGAYAIPCYADDAAAIGRLVDEEAAASGLSVAPDARAMLVAQLGGDRL
ISRAEVRKLCLYAHGKGRIGVDDVAATIGDSASVAFDDVVDAAAVGDLPGLSLALGRAWT
DGMDPGTLALSALRFFQSLDEARGAVDGGRRPADVVDGMRPPVFYKRKDKMTLALGAWSA
IRLEKAGQLLADTVRDARLNPALSRQIVADALVTIGRVAEQAIRTRR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcggtcaaggcccaggacgccgatcgcgtcgtcgcccgcccgccggccgaggtt
tcgttctacctggtctacgggcccgacgccgggctcgtcgccgaacgcgccgagaagctc
gccgccgccgccgccgacccggccgatccgttctcgctgatccgcctcgaggccgcgcag
gtcgcttcggatccgaatcgactgcccgacgaggcctacgcggtctcgatgttcggcggc
cgccgtgccatcctggtccgcgacgccggcagccggccctcgctcgccggcatcctgacg
ccgctgatcaagtcgccgccgcccgagaccaccttcgtcctcgacgccggcgacctcaag
aaaaccaatccgatccgcaccctgttcgagcgcgaacgcggcgcctatgccatcccctgc
tacgccgacgatgccgccgcgatcggccggctcgtcgacgaggaggcggcggcgtccggg
ctctcggtcgcgcccgacgcccgcgccatgctggtcgcccagctcggcggcgaccgtctg
atctcgcgcgccgaggtgcgcaagctctgcctctacgcccacggcaagggccgcatcggc
gtcgacgacgtcgccgccacgatcggcgacagcgcctcggtcgccttcgatgacgtggtc
gatgccgccgccgtcggcgaccttcccggcctgtcgctggcgctcgggcgcgcctggacc
gacggcatggatcctggcaccctcgccctttccgcgctgcgcttcttccagagcctcgac
gaggcccgcggcgccgtcgacggtggacgccgtcccgccgacgtcgtcgacggcatgcgt
cccccggttttctacaagcgcaaggacaagatgaccctggcgctcggcgcgtggtcggca
atccggctcgagaaggccggacagctgctcgccgacaccgtccgcgacgcccgcctcaat
ccggcgctgtcccgccagatcgtcgccgacgcgctggtcaccatcggccgcgtcgccgag
caggcgatcaggacgcgccgctga
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