Pleomorphomonas sp. SM30: OHA_1_03064
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Entry
OHA_1_03064 CDS
T05766
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pleo
Pleomorphomonas sp. SM30
Pathway
pleo00541
Biosynthesis of various nucleotide sugars
pleo01100
Metabolic pathways
pleo01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OHA_1_03064 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pleo01005
]
OHA_1_03064 (kdsA)
Enzymes [BR:
pleo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
OHA_1_03064 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pleo01005
]
Lipid A
OHA_1_03064 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBE73453
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All DBs
Position
1:complement(3355068..3355913)
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AA seq
281 aa
AA seq
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MQSKPVTVGDVTFANDRPFVLISGPCQIESREHALSVAAALAAATRAAGVPFVFKASYDK
ANRTSLKGARGVGIEAGLAILAEVRATFGCPVLTDVHDVEQTRRAGAVVDILQIPAFLCR
QTDLLIAAGETGACVNVKKGQFLAPWDMANVADKIASTGNERILLCDRGTSFGYGALVTD
FRGLPTMAETGYPVVFDATHSVQEPGGRGTSTGGKRAFAPALARAALAVGCAAVFAEAHD
DPDSAPSDGPNMLPLAWIPDFLADLVAADRVGKGRHLAAAF
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtccaagcccgtcaccgtcggcgacgtcaccttcgccaacgaccgccccttcgtc
ctgatctccggcccctgccagatcgagagccgcgagcacgcgctctccgtggcggccgcg
ctcgccgcggcgacccgggcggcaggcgtccccttcgtgttcaaggcctcctacgacaag
gccaaccggacctcgctgaagggtgcgcgcggcgtcggcatcgaggccggcctcgcgatc
ctcgccgaggtccgcgccaccttcggctgccccgtgctgaccgacgtccacgacgtcgag
cagacccgtcgcgccggcgcggtcgtcgacatcctgcagatccccgcgttcctctgccgc
cagaccgacctgctgatcgccgccggcgagaccggtgcctgcgtcaacgtcaagaagggc
cagttcctggcgccctgggacatggccaacgtcgccgacaagatcgcctcgaccggcaac
gagcgcatcctgctctgcgaccgcggcacctccttcggctacggcgccctggtcaccgac
ttccgcggcctgccgaccatggccgagaccggctatcccgtggtgttcgacgccacccat
tcggtgcaggagcccggcgggcgcggcacctcgaccggcggcaagcgcgccttcgctccg
gcgctcgcccgcgccgccctcgccgtcggctgtgccgcggtgttcgccgaggcccacgac
gacccggattccgcgccgtccgacggcccgaacatgctgccgctcgcctggatcccggac
ttcctcgccgacctcgtcgccgccgaccgcgtcggcaagggccggcatctcgccgcggcc
ttctga
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