Plectropomus leopardus (leopard coralgrouper): 121947002
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Entry
121947002 CDS
T07454
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121947002 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plep03400
]
121947002 (xpc)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121947002 (xpc)
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GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
121947002
NCBI-ProteinID:
XP_042347792
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Position
8:10942637..10954631
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AA seq
933 aa
AA seq
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MAKRRECAQTGADTKKLKQGLKAKSSGAKLRAKEKDAGNGTTEEEEKLERKVKPKSRSST
KRAAENATSTTSTTAVKTSKYFQSPVKEEGADSEEDFDMVTSPPHVVTVNVKKTEKEEEE
EDEDDSEEDEDDWEEVEELSEPLGPVEPPEPVLPSQPVEIEIETPEVRKRQKRQAEFDSY
LRRMMNRYKKDVLIDTHKVHLMCLIASGMFRSRLCSEPDLLAITLSLLPSHYGMVAKERI
DQNYLSGLLKWFRATFTLNPSLPCEERPDPRALLERRLASLSAKTHQEMTHLFLLVLRSL
QLFCRLVLSLQPIPFKPPSAKGKGARASTGASGKSNTNQETSKNISPKPKVSPGTKRPAG
EGKMKADRGGKKAKIKEIKEEDEEEKPITSGGQRPKNSKRRSIASKISYKEESNSEGEME
EEGLSDEEEFQGPSEEKSDDSEGGSKSTKGKKGKGKSKAKETNSKNTAAQKRGSGGGKKQ
VKDGESKEFEEDDEEEGVMSNRTKRSGKKKEGPGADEWLEVYLDKTSSWVCVDVEHGVGM
PHLCSQNATAPVTYVVSVDGDGFVKDLGRKYDPTWLTSSRKRRVDEDWWEETLEPFLGPD
DERDRKEDKELQNKLLSKPLPISIGEYKNHPLYALKRHLLKYEAIYPSTATVLGYCRGEP
VYSRDCVHTLHSRDTWLKEARTVRLGEEPYKMVKGFSNRSRKARMVSEQKDENDLALFGE
WQTEEYQPPLAVDGKVPRNDYGNVYLFKPCMLPVGCVHLRLPNLNRVARKLNLDAAPAVT
GFDFHGGYSHAVTDGYIVCEEHEEILRAAWVEEQELQKQKEKEKKEKRALSNWTLLVKGI
LIRERLKQRYGKKNQGVGSLAHEGETGGFSSDEEVVEGGSPSAKTAAETLAMSWPQNRQA
EEDEGNISGLKKKTTTKREKRGQEKHMFPFEKV
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcggagagagtgtgcgcagactggggccgatacaaagaaactgaagcagggg
ctgaaggcgaagagcagcggtgcaaaactgagagcaaaggagaaagatgcaggtaatggc
accacagaagaagaggagaagctcgagaggaaggtcaaaccgaaatcacgatcctccaca
aaacgagcagcagaaaacgccacttccaccacatccacaactgctgtcaaaaccagtaaa
tacttccagtcgccagtgaaagaggagggggctgacagtgaagaagactttgatatggtg
acctcaccacctcatgtggttacggtgaacgtcaagaaaacagagaaagaggaagaggaa
gaggatgaggacgacagtgaggaagatgaggatgattgggaggaagtggaagagctttct
gagccgctgggtccagttgaaccaccagaaccagtcctgccctctcagccggttgagata
gagattgagactccagaagtcaggaaaaggcaaaaaaggcaggcggagtttgactcgtat
ctgaggcgcatgatgaaccgatacaaaaaggatgtgctgatagacacacacaaggtccat
ctgatgtgcctgatagccagtgggatgttccgcagccgtctgtgcagtgaacccgacctg
ctggccatcactctgtcgctgctgccctctcactacggcatggttgccaaggaacgcatt
gaccaaaactacctctccggactcctcaaatggtttagagcaacgttcactctcaacccc
agtcttccctgtgaggagcgtccggacccccgtgctctgcttgagaggcggctcgccagc
ctgtctgccaaaacccaccaggagatgactcatctgttcctgttggttctgaggtctctg
cagctcttctgccgattggttctttcattgcagccgattcccttcaaacccccatcagcc
aagggcaagggcgctagagcatctaccggtgcctcaggaaagagcaacactaaccaggag
acctccaagaacatctcccctaagccgaaggtctcccctggcaccaagagaccagctgga
gaggggaagatgaaggcagaccgaggaggaaaaaaagcaaagattaaagaaataaaggag
gaggatgaggaggaaaagcctataacgtcaggagggcagaggccaaagaactcaaagcgt
cggagcatcgcctcgaaaatcagctacaaggaagaaagtaacagcgaaggagaaatggag
gaggaggggcttagtgatgaagaggaatttcaggggcccagtgaggagaaaagtgacgat
tcagaaggaggcagtaaatccacaaaggggaagaaggggaaaggaaaaagcaaagccaaa
gagaccaacagcaagaacactgcagctcagaagagagggagcggtggagggaaaaaacag
gtgaaagatggggagagcaaagagtttgaagaagatgatgaggaagagggagtgatgagc
aacagaacaaagaggagtgggaaaaagaaggaagggcccggagcagatgagtggttggag
gtgtatctggacaaaacttcatcctgggtttgcgttgacgtggagcacggtgtcgggatg
cctcacctctgctcccagaatgcaacggcaccggtgacgtatgtggtgtcggtggatggg
gatggctttgtgaaggacctgggaaggaagtatgatcccacctggttgacatcatccagg
aagaggcgggtggatgaagattggtgggaggaaacacttgagccgttcctgggacccgac
gatgagagggacagaaaggaggacaaggagctccagaacaagctgctgagcaaacccctg
ccgatctccataggggagtataagaaccacccgctgtacgccttaaagagacacctgctg
aaatacgaagccatctacccttcaacagccactgtgcttggatactgcaggggagagcca
gtgtactccagggattgtgtgcacaccctccactccagagacacctggctgaaagaggca
cggactgtcagactaggagaggagccatataagatggtgaagggcttctctaatcgttcc
cgtaaagccaggatggtgtctgagcagaaggatgaaaatgacctggcgctgtttggagag
tggcagactgaagagtaccagccgcctttagctgtggatgggaaggttccccgtaacgac
tacggaaatgtctacctgtttaagccctgcatgttaccagtgggctgtgttcacctcagg
ctgcccaacctcaaccgcgtggccaggaaactgaacctggatgccgcccctgcggtcaca
ggctttgacttccatggaggatactcacacgctgtgactgatggttacattgtgtgtgag
gagcatgaggagattctcagagcggcctgggtggaagaacaagagctccagaaacagaag
gagaaagagaaaaaagaaaagagggcactctcaaactggactctgctggtgaaggggatc
ctgatcagagaaagacttaaacagcgctacggaaagaagaaccagggagtggggagcctt
gctcacgagggagagactggcggattttcatcagatgaggaggtggttgagggtggaagt
ccttcagctaagacagcagctgagactctggccatgtcctggccccagaacagacaagca
gaagaggacgaagggaacatcagcggactgaagaaaaagacgactaccaaacgagaaaag
agaggacaagagaaacatatgttcccttttgagaaagtgtga
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