Plectropomus leopardus (leopard coralgrouper): 121948681
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Entry
121948681 CDS
T07454
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plep04040
]
121948681 (scn1laa)
Ion channels [BR:
plep04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121948681 (scn1laa)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
PFF1_TM
Zip
ATP-synt_B
New_glue
FraC
Motif
Other DBs
NCBI-GeneID:
121948681
NCBI-ProteinID:
XP_042350013
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All DBs
Position
10:17235471..17264637
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AA seq
1980 aa
AA seq
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MAQLLVPPGPDSLRPFSRESLKAIEARIAEEKAKKPKGEKKKHNDENDLKPSRDLEAGKS
LPRLYGDTPKGMVSIPLEDPDPYYCNTFIVLSKGNCIFRFNAAPALYLLSPFNFLRRISL
RILVHSLFSMVIMLTILVNCVFMTYSTVPEHLKFVEYTFTAIYTFESLVKILARGFCIGK
FTFLRDPWNWLDFSVIIMAYVTTFVPLGNFSVLRIFRVLRALKAISVIPGLKTIVGALFQ
SVKKLADVMILTVFCLSVFALIGLQLFMGHLKQKCVRQPDNSTLNGTTMKDFDWETYALN
KSNLYYLNGKKDPLLCGSGRGAGQCPEGFICWRVGRNPDYGYTSFDSFGWAFLALFRLMT
QDAWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQSQATIKEEQQK
KEEYDAMAEQLKQQQEDAQAAAAAAAAESGEASDKASGPESSSDTSKLSSKSAKERRNRR
RKMKEEEGKGADVRVPKSDSQDSIRKARCRFSVGANQLNYDMKCSPAHQSFLSFRGPLLS
SRRYSRTSLFSFQSQAHDVASENGFADDENSIFEDNRSRRGSLFLPRSDRRSSTMSQNSF
FSHLLLQPNGIKHSSVDRSGVASLVGGNSLPSSPVGLRLPKVTVDMASTGDNADTTDTEY
RQARGGPQQEFMDFLEGPEARQRALSIASVITSTMEELEESRQKCPPCWYNFAHTFLIWE
CCPVWLEIKRMVKLIVMDPFVDLAITICIVLNTLFMAMEHYPMTVGFTDMLTVGNKVFTG
IFTAEMVLKIIALDPYHYFQERWNIFDGVIVSLSLMELCLEDVGGMSVLRSFRLLRVFKL
AKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKISRDCTL
PRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGTTKCIIVYMMVMVIGNLVVLNLFLA
LLLSSFSADNLTVTDEEDNSLQIAIARIHRGIAFVKSYLRSSCNSVCLGKEKKGKGEEKS
LDELHKPLGPNSVPNHTIIDFPKNGNGDVIGVGKNGDKYIVSSKSDDSIMSFINNPSLTV
TVPIAVGESDFENLNTEDFSSASDDEIADDDGQTSSSEGSTIDDLPGREGAESLDFKLEE
HMEPDACFPDGCVQRFQCCQVNVEKGWWKVWWTLRKTCYRIVEHNWFESFIIFMILLSSG
ALALEDVYIEQRKTIKTMLEFADKIFTYIFILEMLLKWVAYGYAKYFTNAWCWLDFIIVD
VSLISMTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIFNVLLV
CLIFWLIFSIMGVNLFAGKYGRCVNKTTNMDFPSTVVTNKTECDNMGKDVARWMIVKINF
DNVGAGYLALLQVATFKGWMDIMYAAVDSQSKPEQQPEYEISLRMYMYFVVFIIFGAFFT
LNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKIQGFI
FDFTTNQAFDIVIMVLIWLNMVAMMVETEEQSKQKEDILYWINLVFIIIFTGECLLKMIA
LRQYFFTNGWNVFDFIVVILSIIGVFLSKLIEAYFVSPTLFRVIRLARIGRVLRLIKSAK
GIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREAGIDDLFNFETFGNSM
ICLFQITTSAGWDGLLSPILNKHEDDCNMSKEHPGSRVKGDCGSYSVGVAFFVSYIIICF
LIVVNMYIAVILENFGVATEESADPLSEDDFETFYEVWEKFDPRASQFMEYNKLSEFADA
LDPPLRIPKPNKMELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILRGQMEERFM
ASNPSKVSYEPITTTLRRKQEDTSAVVIQRAYREYAKKHAAVKPSDRSSDNIRKDQTYTD
KEDLVTDKLKDISSAEKSELTPSAAPQPSCNSVTTNGRNKYEKDKSEKEVEGKDVREQYM
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccaccaggtccagacagcctccgcccgtttagtcgtgagtcc
ctcaaagccatcgaggcacggattgcagaggagaaagccaagaagccgaagggagagaag
aaaaaacacaatgatgagaatgacctcaagcccagccgtgacctggaggcgggcaaatca
ctccctcgtctgtatggggacacccctaaaggcatggtgtcgataccgctggaggacccg
gatccctactactgtaatactttcatagtactaagcaaaggaaactgcatcttccgcttc
aatgccgctcctgccttgtacctcctgagccccttcaacttcctcagaagaatatcactt
aggattttggtacactcattgttcagtatggtgatcatgctcactatcctcgtcaactgt
gtgtttatgacatatagtacagtgcctgaacacttaaagtttgtagagtacacatttacc
gcaatctatacgtttgaatccctcgttaaaattttagctcgagggttctgcatagggaag
ttcacgtttctaagagatccctggaattggttggatttcagtgtcattatcatggcgtat
gtcactacgtttgtacccctgggcaatttttcagttcttcgcatattcagagtgctgaga
gctttaaaagctatttcagttatcccaggcttgaagaccattgttggtgcattgttccag
tctgtgaagaagcttgctgatgtgatgattctcaccgtcttttgcttgagcgtctttgcc
ctcatagggttacagctgtttatgggccatttaaagcaaaagtgtgtgaggcaacctgat
aattccaccctcaatggtacaacaatgaaagatttcgactgggagacatacgcgctcaat
aagagtaatctgtattaccttaacggcaaaaaagatccattgctttgtggatctggccgt
ggagctgggcagtgtccagaggggttcatttgctggagagtgggaaggaacccagactat
ggttacaccagctttgactcatttggttgggcctttctcgctctgtttcgactgatgaca
caggatgcctgggaaaacctttaccagcagacgttgcgggcagctggaaagccctacatg
atcttttttgtgctggtgatattcctcggttccttctacctggtcaacctgatcttagct
gtagtagctatggcctatgaggagcagagccaggccaccataaaggaggagcagcagaag
aaggaagagtatgatgctatggctgagcagctaaaacagcagcaagaggatgcccaggca
gcagcagctgcagcagctgcagagagcggggaggccagcgataaagccagtggccccgag
agctcctctgacacttccaagctcagctccaaaagtgccaaagagagacgcaacagacga
agaaaaatgaaggaggaggagggcaaaggggctgatgtgagggttcctaaatccgattca
caggacagtatcaggaaggctcgctgccgcttctctgtgggtgcaaaccagctcaactat
gacatgaaatgctcacctgcacatcagtcctttctgagttttcgtggacccctgctctcg
tccagacggtacagcaggaccagccttttcagtttccaaagccaagcgcatgacgttgct
tcagaaaatgggtttgcagatgatgagaacagcatttttgaagacaaccggagtcggagg
ggttctttgtttcttccgcggagtgatcgacgcagcagcactatgagccagaacagcttc
ttttcgcatctcctacttcaacccaatgggatcaagcacagctctgtagatcgcagtggg
gttgcgtctctagtggggggcaattcactcccatcgtcacctgtggggctccgtctacct
aaagtgacagtagatatggcttccaccggagacaatgctgacaccactgacacagaatac
agacaggctcgtggaggaccacaacaggagtttatggacttccttgaggggccagaggcc
agacagagagctcttagtatagctagtgtcataactagcacaatggaggaacttgaagag
tccaggcagaagtgtcctccttgctggtacaattttgcccatactttcctcatctgggaa
tgttgtccagtatggctggagataaagaggatggttaagctgattgtgatggatccattt
gtggacctagccatcaccatctgcattgtactcaacacattgtttatggccatggagcat
tatccaatgaccgtcggtttcactgacatgctgactgtgggcaataaggtattcactggc
atcttcacagctgaaatggtccttaagatcattgctttggacccgtaccattacttccag
gagcgatggaatattttcgatggagtcattgtcagcttaagcttgatggaactttgcttg
gaagacgtgggaggcatgtctgttctgagatcattcagactgctgagagtattcaagttg
gctaaatcgtggcccactcttaacacactgatcaaaataattggcaactcagttggggct
ttgggcaacctgacgctggtgctggccattatcgtcttcatctttgctgttgtgggcatg
cagctgtttggaaaaaactacaaggaatgtgtgtgtaaaatctctagggactgcactcta
cctcgttggcacatgaatgacttcttccattcattcctcattgtgttccgagtgctttgt
ggagagtggatagagaccatgtgggactgtatggaggtggctgggacgaccaagtgcatc
attgtctacatgatggtcatggttattggaaaccttgtggtgctgaacctgttcctggct
ctgctgctgagttctttcagcgctgacaacttgacagtgacggatgaggaagacaacagc
ttgcaaattgccattgctcggattcacaggggcattgcctttgtaaagtcctatcttcga
agcagctgcaacagtgtctgtcttgggaaagagaagaaagggaagggggaggaaaaatcc
ctggatgagctccacaaacctttaggtccgaatagtgtccccaaccacaccatcatagac
tttcctaagaatggaaatggggatgtaattggagtgggcaaaaatggagacaagtacata
gtcagcagcaagagtgatgactctataatgtctttcatcaacaatccaagcctgactgtc
accgttcctattgctgtgggagagtctgactttgaaaacctcaacacagaagacttcagc
agtgcctctgatgatgagattgcagatgatgatggccagaccagctcctctgagggcagc
acaatagacgatttgccaggcagggagggagcagagtctttagactttaaattggaagaa
catatggaacctgacgcctgctttcctgatggctgtgtgcaaaggttccagtgttgtcag
gttaatgtggaaaagggctggtggaaggtgtggtggacgcttagaaagacctgttaccgg
atcgtagagcacaactggtttgagagtttcatcatcttcatgatcctgcttagcagtgga
gcactggcacttgaggatgtctacattgagcagaggaagaccattaaaacgatgttggaa
tttgcagacaaaatcttcacctacatctttattctggaaatgttactgaagtgggtggcg
tatggatatgccaagtattttacaaatgcctggtgctggctggactttatcattgttgat
gtctcactgatcagtatgacagccaatgccttgggatattctgaacttggtgccatcaag
tctctgagaaccttgcgagctctgaggcccctaagagccctgtctcggtttgaaggcatg
agggtggttgtcaatgccctccttggagccattccttctatcttcaatgtgctgctggtg
tgtctcatcttctggctcatcttcagcatcatgggagtcaacttatttgcgggaaagtac
ggccgttgtgtcaacaagaccacgaatatggatttcccgtcaacggtggtgacaaacaag
acagagtgtgacaacatgggcaaagacgttgctcgctggatgattgtcaaaatcaacttt
gacaatgttggcgccggttaccttgcactgctgcaagtggctaccttcaagggctggatg
gacatcatgtatgcagctgtggactctcaaagcaaaccagaacaacaaccagaatatgag
atcagcctgcggatgtacatgtattttgttgttttcatcatatttggagccttcttcact
ctcaatctctttattggtgtcatcatagacaattttaatcagcaaaagaaaaagtttgga
ggtcaagacatcttcatgactgaagaacagaagaaatactacaatgccatgaaaaagctg
ggctcaaagaaaccacaaaaacctatacccaggccagcaaacaaaattcaaggattcatc
tttgacttcaccacaaaccaagcatttgatattgtaataatggttctgatatggctcaat
atggtagccatgatggtggaaactgaggagcagtcaaagcaaaaggaggacattctctac
tggatcaatttagtattcattatcatcttcactggagagtgtttgttgaagatgattgca
cttcggcaatactttttcacaaatggctggaatgtgtttgatttcatcgtcgtcatcctc
tcaataattggtgtgtttctctcaaagctaattgaggcgtacttcgtttcaccaacactg
ttcagagttatccgattggctcggattggccgcgtcctccgccttattaaaagtgccaaa
ggaattcgcacactcctgtttgccttaatgatgtcacttcctgccttgttcaacattggt
ctcttgctcttcttggtgatgtttatctatgccatctttggcatgtcaaactttgcttat
gtcaagagggaagcaggcatcgatgaccttttcaattttgagacttttggcaacagcatg
atctgtttgttccagatcaccacctcagcggggtgggatggcctgctttctcccattctc
aacaaacatgaagatgattgtaacatgtcaaaggagcatcctggcagtcgtgttaaggga
gactgtgggagttattctgtgggggttgccttctttgtgagctacatcatcatttgtttc
ctgattgtggtgaatatgtacattgcagttatcctagaaaacttcggtgtggccactgag
gagagtgcagatccattaagcgaggatgattttgaaacgttttatgaggtctgggaaaaa
tttgatccccgtgcatcacagttcatggagtacaataagctgtcagaatttgcagatgct
ctggacccacctttacgcatcccaaagcctaacaagatggaactgatctctatggatcta
cccatggtgagcggtgaacgcatccactgcctggacatcctgtttgcattcacaaaacgc
gttctgggtgagggtggggagatggacatcctgagggggcagatggaggagcgattcatg
gcctccaatccttccaaagtgtcctatgagcccatcactaccaccctacgtcgcaaacag
gaggacacatcagccgttgtcatccagagagcatacagagagtatgcaaagaaacatgct
gctgtaaagccctctgacagatccagcgataacattagaaaggatcaaacatacactgac
aaagaggatcttgtcacagacaaactcaaagacatttccagcgccgaaaaaagtgaactg
acaccttcagcggcccctcaaccctcatgtaacagtgtgacaacaaatgggagaaacaaa
tatgaaaaagacaaaagtgaaaaggaggttgagggcaaagacgtcagagagcaatatatg
taa
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