Plectropomus leopardus (leopard coralgrouper): 121958922
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Entry
121958922 CDS
T07454
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121958922 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121958922 (gspt1)
03012 Translation factors [BR:
plep03012
]
121958922 (gspt1)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121958922 (gspt1)
Translation factors [BR:
plep03012
]
Eukaryotic type
Release factors
121958922 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121958922
NCBI-ProteinID:
XP_042364039
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All DBs
Position
19:complement(20591308..20607673)
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AA seq
585 aa
AA seq
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MDPRDTAPDSWELEEDAEAPAAAAELPAAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
MPAADGAPDPVASMEVAETAAPVENGGTEADMTTEDETWEQKEEPGGGGGGGGQEDLGSG
GACEEGAARNEDEEMMEEEEEEMPMPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGGQI
MYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHF
TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH
LIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPVP
ECPWYTGLPFIAHLDSLPNFTRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVM
MPNRHTVEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTFD
AQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKTGEKSKTRPRFVKQDQVCI
ARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaggaggatgccgaggccccg
gctgcagcggcggagctccccgccgccttcgccgccctcaacgtcaacgccaagccgttt
gtccccaacgttaacgccccggtgtttgtcccgagcttccttcaagccagcgccgtggaa
atgccggctgcagacggtgcccccgatccagtggccagcatggaggtggcagaaacagct
gctccggtggagaatggaggcacagaggccgacatgaccacggaggacgagacgtgggag
cagaaggaggagccggggggaggcggaggaggcggaggacaggaggacctgggctcggga
ggagcctgcgaggagggagccgccaggaacgaggatgaggagatgatggaggaggaagag
gaggagatgcccatgcctaaagtggctccggcaccaccagatgcccccaaaaaagaacac
gtgaacgtggtcttcatcggtcacgtggatgctggtaaatcaactattggaggacagatc
atgtacttaactggaatggtggacaagcgaaccctggaaaaatatgaaagagaggcgaaa
gaaaagaacagggagacatggtacctgtcgtgggctctggacacaaaccaggaggagaga
gacaaggggaagacggtggaggtcggcagagcttactttgagaccgagaagaaacacttc
actatcctggatgcacccggacacaagagcttcgtccccaacatgatcggtggagcttca
caggccgacctggcagtcctggtgatttcagcgagaaagggggagtttgagaccggcttt
gagaagggcggacagacgcgggaacacgccatgctggctaaaacagcaggagtcaaacat
ctcattgtgctcgtcaacaagatggacgaccccactgtcaactggagcctagaaaggtat
gaagagtgtaaggagaagctggttccatttctaaagaaggtgggcttcaaccctaagaag
gacatccactttatgccttgttctggactcacaggtgccaacctcaaggaccccgtgccc
gaatgcccctggtacacgggtttgccatttattgcccatctggacagtttgccaaacttc
accagatccagcgacggaccagtcagactacctatcgtagacaagtataaggacatgggc
acggttatcctcgggaagctggagtctggatccatcagtaaagcccagcagctggtcatg
atgccaaacaggcacacggtggaggtgttgagcctgctgagcgacgatgtggagacagac
gatgcaagtcctggggagaatctgaagttgaggttgaagggcatcgaggaggaagaaatc
ctgcctggttttatcctctgtagccctgacaacctgtgccactcgggccgcacctttgac
gcacagatcgtcatcattgagcacaaatcaatcatttgtcctggttacaatgcagtcctt
cacatccacacctgcatcgaagaagtgcagatctcagccttaatctgtctggtggacaag
aagacgggggagaaaagcaaaacacgaccacgctttgtgaagcaggaccaggtgtgtatc
gccaggctccgggcagctggagtcatctgcttagagaccttcaaagacttccctcagatg
ggacgattcacactgcgagacgagggcaaaaccatcgccatcggcaaagtgctgaagctg
gtgccagaaaaggactaa
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