Plectropomus leopardus (leopard coralgrouper): 121959953
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Entry
121959953 CDS
T07454
Symbol
whrna
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plep03037
]
121959953 (whrna)
Cilium and associated proteins [BR:
plep03037
]
Primary cilia and associated proteins
USH complex and associated proteins
121959953 (whrna)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
USH1C_N
DUF6288
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
121959953
NCBI-ProteinID:
XP_042365443
LinkDB
All DBs
Position
20:complement(23432397..23597687)
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AA seq
967 aa
AA seq
DB search
MSSTDLERMSLSSSANSVASSARTLSANVRKLHNALNLLLNDFEREQFIHCLNVYHSKRN
VYDLVQTLNVILNAPSKRQLLPMLRLVIPRSDQLLFEQYTSEGLYLKSDLVASNGNAETP
PGDFPSASPTPPGHFSPNNPPEFQVALRGSPDSFSTSSDGTAPPMVPLLGRNFVHEPPGE
IRQVTMKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQIMKVNDKVFD
KVTHAEAVKVLKGSKKLNLSVRSVGRIPGGYVTNHVYTWVDPQGRSVSPPPDLPEHRSAT
LRRTDSQRRSNMQLLQEGDEKKVNLVLDDGRSLGLMIRGGAEYALGIYITGVDQGSAAEC
GGLKVGDQILEVNGRSFLSIPHDEAVRVLKSSRHLMMTVKDVGRLPHARTVVGETKWIAS
SQIGESSANSSVAGFSVDKGASAAGKPGFYKGVAGSQVTLSSLVNQSRAMLEEQARHLLT
EAERQTMGYYVEEYRDGHIGVEQLVVALFELLNTHAKFSLLSEVRGLVTPQDLEHFDGLV
LRREIQALKARQGTAGATALQPDSLSMVSYPDTLTSSSASFMTNTTLSSARNDSVVESNE
EDPPESLNTLLTDISLDDVQSATAESPPSFKPPPPPGVQRRPTRRDQLNKCPSSESSHSG
LYFTAPTSHNHSKEPGHAPAPPSQLHKREHARDPSRDYAVIRKKDPSVPSKKEQITSAQL
SMVTQHNIGPFPRVQSPGRTTKPAAPSPSPPPPPPLPAPPPPPLLPLKPLSMSKASPSSP
GSKQQFVTVEVHRPNAEPDVNEVRPLPQARGGALSQLSDSGQTLSEDSGVDIAESGHISK
DSSPHSSRTRHPGDTQGGGGDKPSKPPGLLEPTSTLVRVAKSASTLGIAIEGGANTRQPL
PRIVTIQRGGSAHNCGLLKVGQVILEVNGVTMRGREHRDAARLIAEAFKTKERDYVDFLV
TDFNVAL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccgacctggagcgcatgtcgctcagctcctcggcaaactcggtggcctcc
agcgcgcggacgttgtcggccaacgtgaggaagctgcacaacgcgctcaacctcctgctc
aacgacttcgagagggagcagttcatccactgtctcaacgtctaccactccaaacgcaac
gtgtacgacctggttcagaccctcaacgtgatcctcaacgcgcccagcaagcggcaactt
ctgcccatgctgcggctggtcatcccccgctctgaccagctcctcttcgagcagtacacc
tcggagggcctctacttaaaatcggatttagttgcaagcaatggcaacgccgaaaccccg
ccgggcgacttccccagtgccagcccgactccccccgggcatttctcgcccaacaacccg
cccgagtttcaggtggcgttgcgcggctcgccggacagcttcagcaccagcagcgacggg
acagctccccccatggtgccgctgctcgggaggaactttgtgcacgagccgcccggtgag
atccggcaggtcaccatgaagcgacataagagcaacgagggcctgggattcagcatccgc
ggcggctcggagcacggtgtgggcatctacgtgtctctggtggagccggggagcctggcg
gagaaggagggtctccgggtcggtgatcagatcatgaaagtcaacgacaaagtcttcgac
aaagtcacgcatgctgaagcagtgaaggtgctgaagggcagtaaaaagctgaacctctct
gtgcgttcagtcgggcggattccaggtggctacgtcaccaaccatgtttatacctgggtt
gaccctcagggtcggagtgtgtcgcctcctcctgacctgcctgagcatcggagcgccacc
ctgagaagaactgacagccagcggcgcagcaacatgcagctactgcaggagggagacgag
aagaaggtcaacttggttttggatgacggccggtctctgggtctcatgatccgaggtgga
gcagaatatgctctgggtatttacatcaccggagtggaccagggatcagcagcagagtgt
ggaggactcaaggttggcgaccagatcttagaggtgaatggccgcagctttctgagcatc
ccgcacgacgaagccgtccgggtcctgaagtcgtcgcggcacctgatgatgacggtgaaa
gacgtgggtcgcctgccgcacgccaggacggtggtgggggagacgaagtggattgccagc
tcacagattggggagagctccgccaacagcagcgtggcgggcttctcggtggacaaagga
gcctctgcagcaggaaagcctggcttttataaaggcgtggcgggctcacaggtgaccctc
tccagccttgtgaaccagtcgcgggccatgctggaggagcaagcacgccacttgctgaca
gaggcagagcggcagaccatgggctactacgtggaggagtaccgggatggacacatcgga
gtggaacaactcgtcgtggcgctgttcgagctgctcaacacacatgcaaagttctctctg
ctgtcagaggttcgcggcctagtcaccccacaggacctggagcactttgatgggctggtg
ctgagacgggagatccaggctctaaaggcaagacaggggacagctggagccacggcgctc
caaccggattccctgtccatggtgtcgtacccggacaccctgacctcgtcttcagccagc
ttcatgaccaacaccaccctcagctctgcacggaatgacagcgtggtggagagtaatgag
gaggatcctccggagagtctgaacacgctgctaaccgacatctctctggacgacgttcag
tccgccacagctgaatcccccccctccttcaagcctccgcccccacccggggtgcagagg
cgcccgactagacgagatcagctcaacaaatgcccctcgtccgagtcctcccactcaggc
ttgtacttcacagccccgacctctcacaaccacagcaaagagccaggacacgcccccgcc
ccgccctcacaactccacaaacgggagcacgccagggacccgtctcgggactacgcggtc
atcagaaagaaagacccttcggtaccgtccaagaaagagcagataacctctgctcagttg
tccatggtcacacagcacaacatcggccctttccccagagtccagtcccccggcagaacc
accaaacctgctgccccgtccccttcgcctccacctccacctccgctccctgcacctcct
ccgccccccttgctgccccttaaaccactgtccatgtccaaagcctctccctcctctcct
ggctctaaacagcagtttgttacagtggaggttcacaggcccaacgcagagccggacgtc
aacgaggtgcggccgctgccccaagctcgaggtggtgccctgtctcagctgtcagacagc
ggccagaccctcagcgaggacagcggggtggacatagctgagtcaggacacatcagcaaa
gacagcagtccccattcctcacgcacacgccaccccggagacacccaggggggcgggggg
gacaaaccctccaaaccgccggggctgttggagcccacctcgacactagtgagggtggca
aagagtgccagcactctgggcatcgccattgaaggtggagccaacactcgccagccgctg
ccacggattgtcacaatacagaggggcggttcggctcataactgcggcctgttgaaggta
ggtcaagtgatcctggaggtaaatggcgttaccatgaggggccgcgagcacagggacgcc
gcacgcctcatcgctgaggcctttaagaccaaagagagggactacgtggacttcctggtg
accgacttcaacgtggcgctatag
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