Plectropomus leopardus (leopard coralgrouper): 121962886
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Entry
121962886 CDS
T07454
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b
KO
K04834
voltage-gated sodium channel type II alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plep04040
]
121962886 (scn1lab)
Ion channels [BR:
plep04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121962886 (scn1lab)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
ATP-synt_B
PKD_channel
GPHH
Spem1
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
121962886
NCBI-ProteinID:
XP_042369142
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Position
24:13964653..14006665
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AA seq
2016 aa
AA seq
DB search
MAQLLVPPGPDSFRPFVPESLAAIERRIAEEEARRPRVERRIDSDDENGPKPNSDLEAGK
SLPFIYGDIPPHLVSTPLEDMDPFYSNQKTFIVLNRGKAIFRFNATPALYILNPFNPLRR
IAIRVLVHSLFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRVPVSINATNSSNFDPQDTFS
NSSLLESNVTESSFNWTEYISDERNYYYLPGRRDALLCGNGSGAGLCPEGFSCIKAGRNP
DYDYTSFDTFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLI
LAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAAMESGEYSGRGGPT
SESSSGTSKLSSKSAKERRNRRKKRKQREEEEERGVRDKFHKSESEDSIKRTSFRFSIDA
NRLSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDMGSENDFADDEHSTFEE
SDSRRGSLFLPRRLERRCSAVSQTSLGAPRIMLPANGKMHCAVDCNGVVSLVGGTSVTTS
PVGLLLPEGTTTDTELKKRRSGFHQPSMDYLDEPGGRQRAMSVASILTNTMEELEESRQK
CPPCWYRFANTCLIWDCCPAWLKIKEVVSMVVMDPFVDLAITICIVLNTLFMAMEHYPMT
KEFDNVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVE
GLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFG
KSYKECVCKISDECVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFM
MVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGIAFVKSMVRQF
LQSLCFGGGSKGSVLGEESKPLDELHSNGKGNCISNHTSVEITKDPGGVYMTEGNGRPGG
GLVVGVGVGGDTTEKYPTEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDV
EGSKEKLDAEPQPLSSSEGSTVDIRPPGDGVDSVELEPEESLDPEACFTEGCVSRFQCCQ
INEEGDHFKHWWTLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTIKTVLE
YADKVFTYVFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELTAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY
YYCVNTTTDEIFPIDVVNNKSDCLNLVDQSARWKNVKINFDNVGAGYLALLQVATFKGWM
DIMYAAVDSRNVEDQPEYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGG
QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPNNAFQGCVFDCITKQAFDIVIMILICLNM
VTMMVETDDQTPDMDKILYWINLVFIVLFTGECVLKMISLRHYYFTIGWNIFDFVVVILS
IVGMFLSEVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGL
LLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILN
KREPDCDSQMEHPGNSYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEE
SAEPLSEDDFEMFYEVWERFDPDATQFVEYSKLSDFADALDPPLRMPKPNMIQLISMDLP
MVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQMEERFMASNPSKVSYEPITTTLRRKQE
DMAAIIIQRAFRRYMIRLAMKKASALYKEQLKEGIRDPDKDVMVISKFTENSTSDKTDMT
PSTASPPSYNSVTKSDKDKYEKEKSEKENKAKDRKK
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttccgccccttcgtccccgagtcg
ctggccgccatcgagaggcgcatcgccgaggaggaggcccggagaccacgggtggagcgc
cgcatcgacagcgacgatgaaaatgggcccaagcctaacagtgacctggaggcggggaaa
tctctccccttcatctatggggacatccctccccacctggtgtccacccctctggaggac
atggaccccttctacagcaatcagaagaccttcatagtattgaatcgcgggaaggcaatc
ttccgtttcaacgccactcctgccttgtacatcttaaaccccttcaaccctctaaggagg
atagctataagagttttagtacactcgttgttcagcatgttaatcatgttcaccatcctg
accaactgtgctttcatgaccctcagtaatcccccagaatgggccaagaatgtagagtac
acattcacagggatttacaccttcgagtcccttataaagatcctggccaggggcttctgt
gtggggaagttcactttcctgcgggacccgtggaactggctggatttcagtgttatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcactgcgaaccttcagg
gttctgcgagccttgaaaactatatcagtgatcccaggcttgaagaccatcgtcggcgca
ctgatccagtcggtgaaaaagctgtcggacgtcatgatcctcactgtgttctgcctcagc
gtcttcgccctcatcggcctgcagctcttcatgggcaacctgaggcagaagtgcgtgcgc
gtgccagtctccatcaacgccaccaacagcagcaacttcgatccccaagacacgttttcc
aacagcagcctgctggaaagcaacgtgacggagagttccttcaactggactgagtacatc
agtgatgagcgtaattactattacctccctggccgtagggatgctctgctctgtgggaac
ggcagtggcgcagggctctgtccggagggcttctcgtgcatcaaggcgggccgtaatcca
gactacgactacaccagcttcgacaccttcagctgggcgttcctctccctgttccgactc
atgactcaggacttctgggaaaacctctaccagcagactctgcgcgcggcaggaaaaccc
tacatgatcttcttcgtgctggtgatcttcctgggctccttttacctggtcaacctgatc
ctggccgtggtggccatggcttacgacgagcagaaccaggcgaccatcgaggaggcgcag
cagaaggaggaggagttccaggccatgctggagcagctgaagaggcagcaggaggaggca
caggttgccgcggcagcagccatggagagcggcgagtacagcgggagagggggccccacc
tcagaatcctcctcagggacgtctaagctgagctcgaagagtgccaaggagcgacgcaac
aggcggaagaagaggaagcagagggaggaggaggaggagaggggggtgcgcgacaagttt
cacaagtcagagtctgaggacagcatcaagaggaccagcttccgcttctccattgatgcc
aatagactttcatatgagaaaagatgctcctcacccaaccagtctctcctcagtatccgt
ggatccctgttttcacctcgcaggaacagccgcgccagcctgttcagcttccgcggccgg
gcacgcgacatgggctccgagaacgacttcgccgacgacgagcacagcaccttcgaggag
agcgacagccgcaggggttccctgttcttgccacgccgtcttgagcgccgctgcagcgca
gtcagccagaccagcctcggggcgccgcggatcatgctccctgccaacggcaagatgcac
tgcgccgtagactgcaacggcgtcgtatcactggtcggtggaacttctgtaacaacctcc
cctgtaggtctcctgctgcctgagggaacgacaacagatactgagctgaagaaacggcga
tcaggttttcaccagccatccatggattatttggatgaaccaggcggcaggcagagagcc
atgagtgtggccagtatcctcaccaacaccatggaagagctcgaagagtccagacaaaaa
tgccccccctgctggtatagattcgccaacacctgtctgatctgggattgttgccccgcg
tggctgaaaatcaaggaggtggtcagcatggtggtcatggacccgtttgtggatctggcc
atcacgatttgcatcgtcctcaacacccttttcatggccatggagcattaccccatgact
aaagaatttgataatgtcctctcagttggaaacctggtgttcacaggcatcttcacagca
gagatgtgcttcaagatcatcgctctggatccctactactacttccaggagggttggaac
atctttgacggcatcatcgtcagtctcagcctgatggagctcggcttggccaacgtagaa
ggcttgtctgtgctcaggtccttcagattgctgagggtcttcaaactggccaagtcatgg
cccactctgaacatgctgatcaagatcatcggaaactcggtgggagctctggggaacctg
actctggtgctggccatcatcgtcttcatcttcgccgtggtgggcatgcagctgttcggc
aagagctacaaggagtgcgtgtgtaagatttcggacgaatgcgtgctgccccgctggcac
atgcacgacttcttccactccttcctcatcgtgttccgggtgctgtgcggagagtggatc
gagaccatgtgggactgcatggaggtggctggacagagcatgtgtctgatcgtcttcatg
atggtcatggttatcggaaacctggtggttctaaacctgttcttggctctcctcctgagc
tcattcagcgccgacaacctggcagcaactgacgacgacagcgagatgaacaacctgcag
atcgctgtgggccggatccagcgaggcatcgcatttgtcaaatccatggtgcggcagttt
ctccagagcctctgcttcggcgggggcagtaagggctccgttctgggtgaggagagcaaa
cccttagatgaactgcacagcaacggcaagggcaactgcatctccaaccacacgtcagtg
gagatcaccaaagaccccggtggggtgtacatgacggagggcaatggacggccgggagga
gggctggtggttggggtcggggttggtggggacactacagagaagtacccgacggaggaa
tgtgactacatgtcatttattcataaccccagcctgacagtcacggtgcccatcgcagtg
ggcgagtcggactttgagaacctaaacacagaagatttcagcagcgactcgtcagatgtg
gagggcagcaaagagaagctcgatgcagagccccagcctctgagctcatcggaggggagc
acagtcgatattcgccccccaggagacggggtggattcagtggagctggagccggaggag
tcgctggacccagaggcctgcttcacagagggctgtgtgagcaggttccagtgctgccag
atcaatgaggagggggaccattttaagcactggtggactctcaggaaaacctgctttatc
atagtggagcacaactggtttgaatccttcatcatattcatgatcctgctcagcagcgga
gcgctggcgtttgaggacatttacattgaacagaggaggaccattaaaacagtgctggag
tacgcagacaaggtcttcacatacgtcttcatcctggagatgctgttgaagtgggtcgcg
tacggatttgtcaagtacttcaccaacgcctggtgctggctcgacttcctcatcgtagac
gtgtccctggtcagccttgtagccaacgctctgggctactctgagctcacagccatcaaa
tctctgaggacgctgcgagccctgcggcccctgagggccctgtcgcggttcgagggcatg
agggttgtggtgaacgcgctgctgggggccatcccctccatcatgaacgtgctgttggtc
tgcctcatcttctggctcatcttcagcatcatgggtgtcaacctgtttgcagggaagtac
tattactgcgtcaacaccacaacagacgagatcttccccatcgacgtcgtaaacaacaag
tcagactgcctgaacttggtcgatcaaagcgcccgctggaagaacgtcaaaatcaacttt
gataacgtcggagctggctacctggctctgctgcaagtggccaccttcaagggctggatg
gacatcatgtacgcagccgtggactctcgaaatgtggaagaccagcctgagtacgaagtg
aacctgtacatgtacctctactttgtcatattcatcatcttcggctccttcttcaccctc
aacctgttcatcggtgtcatcatcgacaacttcaaccagcagaagaagaagtttggaggt
caggacatcttcatgacagaagaacagaagaaatactacaacgccatgaagaagctgggc
tccaagaaaccacagaaacctatacctcggccaaataacgcatttcaaggctgcgtgttc
gactgcatcacgaagcaggccttcgacatcgtgatcatgatccttatctgccttaacatg
gtgaccatgatggtggagacggacgaccagacgccagacatggacaaaatcctctactgg
atcaacctggtcttcatcgtgctcttcaccggggagtgtgtgctgaagatgatctccctg
cgtcactattacttcaccatcgggtggaacatatttgactttgtggtggtgatcctgtcc
atcgtaggtatgtttttatctgaggtgattgagaaatactttgtgtccccgacgttgttc
cgagtgatccgtctggccaggataggccgcatcctccgccttatcaaaggtgccaaaggc
atccggacgcttctctttgccttgatgatgtcactccctgccttgttcaacatcggcctc
ctcctcttcctcgtcatgttcatctacgccatcttcggcatgtccaacttcgcctacgtc
aagcgggaggcggggatcgacgacatgttcaatttcgagacctttgggaacagcatgatc
tgtttgtttcagatcaccacgtccgccgggtgggacggcctcctggcgcccatcctgaac
aagcgggagcccgactgtgacagccagatggagcacccgggcaactcctacaaaggcaac
tgcggcaacccgtcagtgggcatcttcttcttcgtcagctacatcatcatctgcttcctc
atcgtggtcaacatgtacatcgccgtcatcctggagaacttcagcgtggcaacggaggag
agcgccgagccgctgagcgaagacgactttgagatgttctacgaagtgtgggagcgcttt
gaccccgacgccactcagttcgtggagtacagcaagctctctgactttgcggacgctcta
gatcctccgctgcgcatgcccaagccgaacatgatccagctcatctccatggatctgccg
atggtgagcggcgagcgcatccactgcctcgacatcttgttcgccttcactaagcgcgtc
ttgggcgaaggcggagagatggacgtgttacgcgggcagatggaagagcgcttcatggcg
tcaaacccttcgaaggtgtcttacgagcccatcaccaccacgctccgccgcaaacaggag
gacatggcggctataatcatccagagagccttccgccgctacatgatccgcctcgccatg
aagaaggcgtccgccctctacaaggagcagctgaaggagggaatccgcgacccggacaag
gacgtcatggtcatcagcaagttcactgagaactccacctcggacaaaacggacatgacc
ccttccacagcgtccccgccgtcttacaacagcgtgacgaaatcggacaaggacaaatac
gagaaagaaaaaagtgaaaaagaaaacaaagcaaaagacagaaagaaatag
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