KEGG   Phaethon lepturus (White-tailed tropicbird): 104614424
Entry
104614424         CDS       T08325                                 
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:3.6.4.13]
Organism
plet  Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03013  Nucleocytoplasmic transport
plet03015  mRNA surveillance pathway
plet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:plet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104614424 (EIF4A3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    104614424 (EIF4A3)
   03015 mRNA surveillance pathway
    104614424 (EIF4A3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plet03019]
    104614424 (EIF4A3)
   03041 Spliceosome [BR:plet03041]
    104614424 (EIF4A3)
   03009 Ribosome biogenesis [BR:plet03009]
    104614424 (EIF4A3)
   03012 Translation factors [BR:plet03012]
    104614424 (EIF4A3)
Enzymes [BR:plet01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     104614424 (EIF4A3)
Messenger RNA biogenesis [BR:plet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104614424 (EIF4A3)
   mRNA cycle factors
    Stress granule specific factors
     104614424 (EIF4A3)
Spliceosome [BR:plet03041]
 Complex C
  Other components
   EJC/TREX
    104614424 (EIF4A3)
Ribosome biogenesis [BR:plet03009]
 Eukaryotic type
  90S particles
   Helicases
    104614424 (EIF4A3)
Translation factors [BR:plet03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    104614424 (EIF4A3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 AAA_22 TniB Flavi_DEAD
Other DBs
NCBI-GeneID: 104614424
NCBI-ProteinID: XP_010291955
LinkDB
Position
Unknown
AA seq 354 aa
FEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRE
LAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLR
TRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPI
RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM
REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN
RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1065 nt   +upstreamnt  +downstreamnt
tttgagaagccctcggccatccagcagagagccatcaagcagatcatcaaggggagggac
gtgatcgcccagtcacagtcaggaacagggaagacagcaacattctccatctctgttctg
cagtgtctggatatacaggttcgcgagacccaggcattgatcttggcaccaactcgggag
ctggctgtacagattcagaagggtcttcttgctctgggagactacatgaatgtccagtgt
cacgcctgcatcggagggacgaacgtgggcgaagatatccgaaaactggattatgggcag
catgttgttgctggcactccaggccgtgtgtttgatatgattcgtcgtcgaagtttaagg
actcgtgccatcaaaatgctggttttggatgaagcagatgaaatgctcaataaaggtttt
aaggagcagatttatgatgtgtacagatacttgcctccagctacacaggtggttctgatc
agtgccactttgcctcatgaaattctggagatgaccaacaaattcatgacagaccccatt
cgcatcttggtgaaacgtgatgagttgaccctcgaaggaatcaagcagtttttcgtggct
gtggagagggaagaatggaagtttgacaccttgtgcgatctctacgacacactcacaata
acccaggctgtcatcttctgtaacaccaagagaaaggtggactggctcacagagaagatg
agagaagccaacttcacagtttcatctatgcatggggacatgccacagaaggagagagag
tctattatgaaagagttcagatctggcgcaagccgagtccttatttcaacagatgtttgg
gctagaggcctggatgtgcctcaggtgtcccttatcattaactatgacctacccaacaac
agagaactctatatacacagaattggccggtcaggcagatacggccgaaaaggtgtagca
atcaactttgtgaagaatgatgacatccgcatcctgcgagacattgagcagtactactcc
actcagatagatgagatgcccatgaatgttgctgatcttatctga

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