KEGG   Phaethon lepturus (White-tailed tropicbird): 104626218
Entry
104626218         CDS       T08325                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
plet  Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:plet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104626218 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:plet03041]
    104626218 (SF3A1)
Spliceosome [BR:plet03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104626218 (SF3A1)
 Complex B
    104626218 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    104626218 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 104626218
NCBI-ProteinID: XP_010292385
LinkDB
Position
Unknown
AA seq 768 aa
PEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFL
NPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQSAQQQLPQKVQAQVIQETVVPKE
PPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLF
NYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQVYYRVEWAKFQERERKKEEEEKE
KERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEM
EVESDEEDEKQEKTDEPPAQLDQDTQVQDMDEGSDDEDEGQKVPPPPETPMPPPLPPTPD
QVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRS
IREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEEKVTWDGH
SGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEKIGPSKPNEIPQPPPPSSASNP
PASAQPITSMPRPPTMPPPVRAAVVSAVPVMPRPPMTSVVRLPPGSVIATPMPPIIHTPR
INVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPSPAPMPPVHPPPPMEDEPVSKKL
KSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLNGQVLVFTLPLSDQVSVIKVKIH
EATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHLALKERGGRKK
NT seq 2307 nt   +upstreamnt  +downstreamnt
ccagaagaggagccaaaagaggaagctgcaccagccaagcctgtggtaggaattatttac
cctcctccagaggtcaggaatattgttgacaagactgccagcttcgtagccagaaatggt
ccagaatttgaagctcgaattcgtcagaatgaaataaataaccctaagttcaatttcttg
aatcccaacgatccttaccatgcatactaccggcacaaagtcagcgagttcaaagagggt
aaagcacaggagccctcggctgctattcccaaggtcatgcaacagcagcaaagtgctcag
cagcagcttccacagaaggtgcaggcccaggtgatccaggagacagtcgttccaaaagag
ccaccgccggagttcgagttcattgcggatcctccctcaatctcagcctttgacttggat
gtggtgaagctcacagcacagtttgtggcccggaatgggcggcagttcttgactcagctg
atgcagaaagagcagaggaactatcagtttgacttccttcgcccccagcacagtctcttt
aactacttcactaagttggttgaacagtacacaaagatcttgatcccaccaaaaggctta
ctcctcaaactcaagaaagaggctgaaaatcccaaggaagtcctagatcaggtgtattac
agagtggagtgggcaaagttccaggagcgagagagaaagaaggaagaggaggagaaggaa
aaggaacgtgttgcttatgcccagattgattggcatgactttgtagtcgtggaaacagtt
gactttcagcccaatgagcaagggaatttccctcctcccaccactccagaagagttggga
gctcgaatcctgatccaggagcgttacgagaagtttggggaaagtgaggaggtagagatg
gaggtggagtcagatgaggaagatgaaaagcaagagaaaacagatgagcccccagcccag
ctagatcaagacacacaagtgcaggatatggatgagggatcagatgatgaagatgaaggt
cagaaggttcctcctcctccagaaaccccgatgccaccacctcttcctcccacgccagat
caggttattgtgcggaaagattacgatcccaaagcctcaaaaccattaccacccgcccca
gctccagatgagtatctcgtttcccccatcactggagagaaaattcctgccagtaaaatg
caagaacacatgcgaattggtctcctggatcctcgatggttggagcagcgtgatcgatcc
atccgtgaaaaacagagtgatgatgaggtctatgccccaggtttggatattgaaagcagc
ttgaagcagctggcagagcgccgtactgatattttcggtgtagaagagactgctattggt
aaaaagattggtgaagaagaaatccagaaaccagaggaaaaggtgacctgggatggccac
tcaggcagcatggcccgcacccaacaggctgctcaggccaatattactctccaagagcaa
attgaggctatccataaggccaagggactggtgccagaagatgacagcaaggagaagatc
ggtcccagcaaacccaatgaaattccccagccaccccctccttcatcggcatcaaatccc
ccagctagtgctcagccgatcacgtccatgcctcgtccacccacaatgccccctcccgtt
cgtgctgctgttgtttctgcagttccagtcatgcctcgtcccccgatgacttccgtggtc
cgtttgcctccgggatccgtcatagccacccccatgccaccaataatccataccccgcgc
atcaacgttgtccccatgccgccctctgctcctcccatcatgagcccccgcccgcctccc
atgattgtaccaacagcatttgttccggcacctcccgtggctccagttccttccccagca
ccgatgcctcctgttcacccaccgccaccgatggaggatgagccagtctcaaagaaactg
aagagcgaagatagcttgattccagaggaggagtttctgcgcaggaacaagggtccggtc
acggtcaaagttcaggttcccaacatgcaggacaagacggaatggaaactgaatggccaa
gtgttggtgttcaccctgccgctctcagaccaggtgtctgttataaaggttaagatccac
gaggccacagggatgccagctgggaaacagaagctgcagtatgagggcatcttcatcaag
gattcaaactccttggcttattacaacatgacaagtggctctctgattcacctggcactc
aaagaaagaggaggcagaaagaagtag

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