Peromyscus leucopus (white-footed mouse): 114694529
Help
Entry
114694529 CDS
T07241
Symbol
Ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pleu03009
]
114694529 (Ighmbp2)
03012 Translation factors [BR:
pleu03012
]
114694529 (Ighmbp2)
Enzymes [BR:
pleu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114694529 (Ighmbp2)
5.6.2.5 RNA 5'-3' helicase
114694529 (Ighmbp2)
Ribosome biogenesis [BR:
pleu03009
]
Eukaryotic type
Other ribosome biogenesis factors
114694529 (Ighmbp2)
Translation factors [BR:
pleu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114694529 (Ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
Viral_helicase1
ResIII
zf-AN1
DEAD
nSTAND3
SLFN-g3_helicase
AAA_16
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
AAA_25
nSTAND_NTPase5
Flavi_DEAD
AAA
PhoH
UvrD_C_2
DnaB_C
VWA_2
ABC_tran
IstB_IS21
Zot
DUF7205
NPHP3_N
NTPase_1
Motif
Other DBs
NCBI-GeneID:
114694529
NCBI-ProteinID:
XP_028727335
LinkDB
All DBs
Position
1:59049020..59071050
Genome browser
AA seq
991 aa
AA seq
DB search
MASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSSQCTGLY
GQRLVTFEPRKFGPVVVLPSNSFTSGDIVGLYDANESSQLATGVLTRITQKSVTVAFDES
HDFQLNLDRENTYRLLKLANDVTYKRLKKALLTLKKYHSGPASALIDVLLGDSAPSPSTE
IPPPTFYNTTLDPSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVNRGLKVLCC
APSNIAVDNLVERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRKDID
QVFGKNKKTQDKREKSNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASCDGPL
KLLPEDHFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRS
LMERLAEKHGAGVVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADT
EETRVPLLLIDTAGCGLLELNEEDSQSKGNPGEVRLVSLHIQALVDAGVHAGDIAVIAPY
NLQVDLLRQSLSHKHPELEIKSVDGFQGREKEAVILTFVRSNRKREVGFLAEDRRINVAV
TRARRHVAVVCDSRTVNSHAFLKTLVDYFTEHGEVRTAFEYLDDIVPENYTHEGSQGHSH
GPKTRGPATSTRKPSGEQESGQEARAAAGQGRRKPSARPPGPQGHPQPSSGASDSDRTGG
TDRTEHLRAVIEKFVASKESQLEFPTSLSSHDRLRVHQIAEEFGLRHDSTGEGKARHITV
SRKSPAGPGGVAPRPPSPPSPAQAEPQPLAEEPPGQAQGPTQLDLKALHLERLQRQPRSQ
AQAAKAQPGLGLRPQKAPQKKKKKETKGLHAALPCEDDFDALVSAVVKADNTCSFAKCSA
STTTLGQLCMYCNRCYCLSHHLPEIHGCGEKARAHARQRISREGVLYAGSGTRDRALDPA
KRAQLQRRLDKKLGELSSQRTSKKKEKERGT
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtccaccgtggagagtttcgtggcccagcagctacagctgctggagctggag
cgggacgccgaggtggaggagcgcaggtcctggcaggaacacagttctctgaaagagctc
cagagccgaggggtctgtttgctgaagcttcaagtgtccagccagtgcaccgggctgtac
ggacagcggttggtcacctttgagcctaggaaattcgggcctgtggtggtgcttcccagc
aacagcttcacttctggtgatattgtgggtctgtatgatgctaacgaaagcagccagctg
gctactggggtcctgacccgcatcactcaaaagtcagtcacggtggcctttgacgagtcc
catgatttccagttgaacctggaccgagagaacacctacagactgctgaagctcgccaat
gacgtcacctacaagcgactgaaaaaagcgctgctgacactgaagaagtaccactctggg
ccagcatccgcactcatagatgtccttttgggtgactccgccccaagtccctccaccgaa
atacccccacccactttctacaacacgaccctggacccttcccagaaagaagctgtatct
tttgcactggcccagaaagaacttgccatcatccacggacctcctggtaccgggaagacg
acaactgtggtggaaataatcctgcaagctgtgaatcgaggcttaaaggttctgtgctgt
gctccctccaacatcgctgtggacaacctggtggagcgtctggccctgtgtaagaagcgg
attctgcgcctggggcaccctgcccgcctcctggagtctgcccagcagcactcactggac
gccgtgctggcacgcagtgacaacgcccagattgttgctgacatcagaaaggacatcgac
caggtctttggcaagaacaaaaagacccaggataagagagagaaaagtaattttcgaagt
gaaattaagttactaaggaaggaactgaaggagagagaagaagcagccatagttcagagc
ctcactgctgcagacgtggtcctagcgaccaacacaggtgcgtcttgcgatggccctctg
aagctgctgcctgaagaccactttgatgtggtggtggtggacgagtgtgcccaggccctg
gaagccagctgctggatccccctactgaaggccccaaagtgcatcctagccggagaccac
aagcagctgccacccaccactgtctcccacaaggcagcactggctgggctgtcccgcagc
ctgatggagcgtctggcggagaagcatggcgctggtgtggtaaggatgctgacggtacag
taccggatgcaccaggccatcacgcgctgggcctcggaggccatgtaccatgggcagctt
actgcccatccctctgtggcgggacacctcctgaaggatctcccaggtgtggctgacaca
gaggagacacgtgtccccctgctgctcatagacacggccggctgtgggctgctggagctg
aatgaggaggacagccagtccaagggaaacccgggcgaagtccgccttgtctctttgcac
atccaggcgctggtggatgccggggtccacgcaggtgacattgctgtcatcgctccctac
aacctccaggtggacctgctcagacagagcctctcccacaagcaccccgagctcgagatt
aagtcggttgatggcttccaaggccgagagaaggaggccgtgatcctgacctttgtcagg
tccaacaggaaacgtgaggttggttttctggccgaggacaggcggatcaacgtcgctgtc
acccgtgcccgacgccacgtagcagtcgtctgtgattcccgcactgtcaacagccacgcc
tttttgaagaccctggtggattacttcacagagcatggggaggttcgcacagcttttgag
tacctggatgacattgtccccgagaactacacccatgagggctcccagggacacagccat
ggccccaagaccaggggccctgccacctccaccaggaagccttccggtgagcaggagagt
ggccaggaggccagagcagctgctggacagggccgcaggaagccgagcgcgaggccccca
ggccctcagggccacccccagcccagctccggtgcaagcgactcggacagaactggaggc
acagaccgcacagagcacttgagggccgtgatcgagaagtttgtggccagcaaggagtca
cagttggagtttcccacatccctgagctcccacgacaggctgcgagtccaccagatagct
gaggagtttgggctgaggcacgacagcaccggggagggcaaggcccggcacatcaccgtg
agcaggaagagccctgcggggcctggcggtgtagccccacggcctccctcaccccccagc
cctgcacaggccgagccccagccactggcagaagagcccccggggcaggcccagggcccc
acccagctggacctgaaggcgctgcacctggagaggctgcagagacagccgcgcagccaa
gcccaggcagccaaggctcagccagggctgggtctgcgaccgcagaaggctccacagaag
aagaagaaaaaagaaacgaaaggtctacatgcggctctgccctgcgaagacgactttgat
gccctggtgtccgctgtggttaaggctgacaacacctgtagctttgccaagtgttcggcc
agcaccaccaccctgggccagctctgcatgtactgtaaccgctgctactgcctcagccat
cacctgcccgagatccatggctgcggtgaaaaggctcgcgcccatgcccggcagaggatc
agtcgggaaggagtgctctatgcaggcagtgggaccagggatagggccctggacccggcc
aagagggcccagctgcagaggaggctggacaagaagctgggcgagctcagcagccagagg
acaagcaagaagaaggagaaggagaggggtacatga
DBGET
integrated database retrieval system
