Panthera leo (lion): 122208573
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Entry
122208573 CDS
T10741
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
plez Panthera leo (lion)
Pathway
plez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122208573 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plez03019
]
122208573 (CNOT1)
Messenger RNA biogenesis [BR:
plez03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122208573 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122208573 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
122208573
NCBI-ProteinID:
XP_042775703
LinkDB
All DBs
Position
E2:complement(35074976..35176638)
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLGGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaaa
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagttctgat
cttagaggttttgctgcccagtttatcaaacagaagcttcctgatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacatctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gaacaaatagacgcttttcttaagacgctgcgcagagattttcctcaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattccggaggggtagctaaaaccatgatggagagttccttggctgatttcatgcag
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgtccgggaggttacagctgcccaggttgccagggttttgggaatgatggctcgaact
cattcaggattgacagatggaattccattacagagtatctctgctcctggcagtgggatc
tggagtgatggaaaagataaaagtgacggagcacaggcacacacgtggaatgtagaagtc
ttgattgatgttctcaaagaactgaacccaagtttgaatttcaaggaagtaacttacgaa
ctggaccatcctggatttcaaattcgtgatagtaaaggacttcataatgtggtttatggc
attcagaggggtctaggaatggaagtgttcccagtcgacctcatatatagaccttggaaa
catgcagaaggccagctctcttttattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatacggttgccaccgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctcttctgaggctt
gcagaggtggggcaatatgagcaagttaaacagctcttcagcttccctattaaacactgt
ccagacatgctggtattggccttactacagatcaacacctcttggcacaccttgcgccat
gagctcatctccactctgatgccaattttcctcggaaaccatcctaactctgctattatt
ttgcactatgcgtggcatgggcagggacagtctccctcaatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggggagcagtatgaccaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcgcgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaggcatgtatgactttttta
aagagacggtgcccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccagaaactctggcaacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggagttatccgaaaccatcctcaccatggtagccaattgcagtaatgtt
atgaataaagccagacagccaccacctggagttatgccaaaaggacgtcctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttggtggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttcaacccca
aaccagacaactgcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggctcttggactccctgcagtgaat
aacgacccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctattttcagagaatatataatcatccacca
catccaactatgtctgttgatgaggtattagaaatgttacagaggtttaaagactctacc
ataaagagggaacgagaagtatttaactgtatgttgaggaacttatttgaagaatatcgg
tttttcccccaataccctgataaagagttacatataactgcctgcttgtttggtgggata
atcgaaaaaggactggtcacttacatggcactaggtctggccctgcgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattattttgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatattgagtatggacagcagtctagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagctccccttgctggtcaggttagcacgatggta
accacctcaacaaccaccactgttgctaaaacggttacagtcaccaggccaaccggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacgttgcttgtg
gccacagatcaaactgagagaattgtagagcccccagaaaatatccaagagaaaattgct
tttatcttcaataatctctcacagtcgaatatgacacaaaaggttgaagaactaaaggaa
actgtgaaggaagaatttatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaactttcacagcctctattcaaacttccttgacacgctgaagaaccctgaa
tttaataagatggttctgaatgagacctacagaaacatcaaagtgctcctgacctctgat
aaagctgcagccaatttttcagatcgttctttgctgaagaatttgggacattggctagga
atgatcacgttagctaaaaataaacccatcttacacactgacttggatgtaaaatctttg
ctgctagaggcttatgttaaaggacaacaagagttgctctatgtagtgccctttgttgcc
aaagtcttagaatctagcattcgcagtgtggtttttaggccacccaacccctggacgatg
gcaattatgaatgtattggcagagctacatcaggaacatgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaatgagctaaaacctgga
aacctcctaaaggataaagatcgcctaaagaacttagatgagcaactctctgctccaaag
aaagatgtcaagcagccagaagagctccctcccatcacaaccacaacaacttctacaaca
ccagctaccagtaccacttgtacagccacagttccaccacagccacagtacagctaccac
gacatcaatgtctattcccttgcaggcctggcaccacacattaccttaaatccaacaatt
cccttgtttcaggctcatccacagttgaagcagtgtgtgcgccaggcaattgaacgggct
gtccaggagctggtccatcctgtagtggatcgatcaattaagattgctatgactacttgt
gagcaaatagtcaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcggaacttaacagctggaatggctatgattacctgcagggaacct
ttgcttatgagcatatctaccaacctgaaaaacagttttgcctcagcccttcgtactgca
tcgccacaacagagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtagaaaaagcaggtcctgagatggac
aagagattagcaactgaatttgaactgagaaaacatgctaggcaagaaggtcgcaggtac
tgtgatcctgttgtgttaacatatcaagctgagcggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagagtttgcacgcaatgtgcct
ggcttcttgcccacaaatgatttaagtcagcctacaggatttttagcccaacccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgcattacagaactggag
cagcacctacatgccatcccaccaactttggccatgaatcctcaagctcaggctcttaga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttgctccagaaggcagtagagggtttactagatgccacaagtggtgctgatgctgaccta
ttgctgcgctacagggagtgtcatcttttggtcttaaaagctcttcaggatggccgggca
tatgggtctccatggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatacaatgttgaagcagtggagttgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagcacagtcaatggagaatggtttaaactacatggccgtggca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgctcatgttact
gaggcagatctgttccacaccattgaaactctcatgaggattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtatgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaagactgatgac
ctcataacaaggttctttcgtctgtgtactgaaatgtgtgtagaaatcagttaccgtgct
caggcagagcagcagcacaatcctgctgctaatcccaccatgatccgagccaagtgctat
cacaacctggatgcctttgtccgcctcattgcactgctagtgaagcactcaggggaggcc
accaacactgtcacaaagattaatctgctgaacaaggttcttggtatagtcgtgggagtt
ctcctgcaggatcacgatgtccggcaaagtgaatttcagcagcttccttaccatcgaatt
tttatcatgctgctcttggaactcaatgcacctgagcatgtattggaaaccattaatttc
cagacacttacagctttctgcaatacattccacatcttgaggcctaccaaagcccctggc
tttgtgtatgcctggcttgaactgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaagggatggcctatgtatgcacagctactgattgatttattcaaa
tatttagcgcctttccttagaaatgtggaactcaccaaacctatgcaaatcctctataag
ggcactttgagagtgctgctggttcttttgcatgatttccctgagttcctttgtgattat
cattatggattctgtgatgtgatcccacctaattgtattcagctaagaaatctcatcctg
agtgccttcccaagaaacatgaggctcccagacccattcactcctaatctgaaggtggat
atgttaagtgaaattaacattgcacctcggattcttaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcgatcaccggtcacttttctg
tctgatttgcgcagcaacctacaggtatccaatgaacctggcaatcgttacaacctccag
ctcatcaatgcactggtgctctatgtagggactcaggccattgcacacatccacaacaag
ggtagcacgccatcaatgagcacgatcacccactcggctcacatggacatcttccagaac
ctggctgtggacttggacactgaaggtcgatatctcttcttgaatgcaattgcaaatcag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctgtacctttttgca
gaggccaacactgaagctatccaagaacagattacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtcttcttattaccttcattgagctgattaaaaatcca
gcgtttaagttctggaaccatgaatttgtacactgtgccccagaaattgaaaagttattc
cagtcggttgcacagtgctgcatgggacagaagcaggctcagcaagtaatggaagggaca
ggtgccagttag
DBGET
integrated database retrieval system
